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Update ir_mex_build to build penalty_mex file #32

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Update ir_mex_build to build penalty_mex file #32

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da0b832
Add mex source files to path in setup. Add irt_mex_make to ir_mex_bui…
kristinazvolanek Apr 13, 2026
b41c2ef
Update directory for compiled penalty_mex
kristinazvolanek Apr 13, 2026
713ae45
Update setup.m
kristinazvolanek Apr 17, 2026
8e906c7
Update setup.m
kristinazvolanek Apr 17, 2026
bd6193e
Update mex/src/irt_mex_make.m
kristinazvolanek Apr 17, 2026
a831b4e
Update mex/src/irt_mex_make.m
kristinazvolanek Apr 17, 2026
69bb0cb
Create mex/local directory and update display text.
kristinazvolanek Apr 17, 2026
111bef7
Add mex/local/ (#33)
JeffFessler Apr 20, 2026
0db76ed
Update setup.m
kristinazvolanek Apr 22, 2026
4ad5374
Update setup.m
kristinazvolanek Apr 22, 2026
f377c64
Merge branch 'JeffFessler:main' into mex_build
kristinazvolanek Apr 22, 2026
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1 change: 1 addition & 0 deletions ir_mex_build.m
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Expand Up @@ -12,5 +12,6 @@

ir_mex_build_mri
ir_mex_build_table
irt_mex_make

% todo: ir_mex_build_penal
14 changes: 8 additions & 6 deletions mex/src/irt_mex_make.m
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@@ -1,11 +1,13 @@
% irt_mex_make.m

if ispc
cd penalty
mex penalty_mex.c mexarg.c 'penalty,diff.c' -DIs_pc -DMmex -outdir ../v7
cd ..
cd mex/src/penalty
% mex penalty_mex.c mexarg.c 'penalty,diff.c' -DIs_pc -DMmex -outdir ../v7
mex penalty_mex.c mexarg.c 'penalty,diff.c' -DIs_pc -DMmex -outdir ../..
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cd ../../..
else
cd penalty
mex -v penalty_mex.c mexarg.c 'penalty,diff.c' -DMmex -outdir ../v7
cd ..
cd mex/src/penalty
% mex -v penalty_mex.c mexarg.c 'penalty,diff.c' -DMmex -outdir ../v7
mex -v penalty_mex.c '../def/mexarg.c' 'penalty,diff.c' -I'../def/' -DMmex -outdir ../..
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cd ../../..
end
5 changes: 3 additions & 2 deletions setup.m
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Expand Up @@ -41,6 +41,8 @@
'fbp', ... % FBP (filtered backprojection) code
'general', ... % generic image reconstruction
'graph', ... % graphics routines
'mex', ... % MEX files
'mex/src', ... % MEX source code
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'mri', ... % MRI reconstruction
'mri/fieldmap', ... % MRI B0 field map estimation
'mri-rf/yip-spsp', ... % MRI RF pulse design
Expand Down Expand Up @@ -70,8 +72,7 @@
% e.g., 7.3 and running on earlier 7.0 won't work.
% If you have mex problems, comment out the following line.
% Much of the toolbox will work without mex, just slower.
addpath([irtdir 'mex/v7']);

% addpath([irtdir 'mex/v7']);
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% do not add the paths below if you are using Matlab!
if ir_is_octave
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