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Slice functions across tidyomics - #19

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stemangiola merged 9 commits into
tidyomics:mainfrom
mikelove:main
Sep 6, 2026
Merged

Slice functions across tidyomics#19
stemangiola merged 9 commits into
tidyomics:mainfrom
mikelove:main

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@mikelove

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Thanks Mike!

Some feedback

  • the thumbnail is missing
Image
  • The post now appear in the past. The date should be set into the future for when we imagine the blogpost will be published (a week from now?)

The content looks great. Just a suggestion, feel free to ignore,

  • Maybe you could have two major headers, in whatever order you like:
    • Transcriptomics: tidyseurat, tidySCE and tidySE
    • Genomics: plyranges

and in transcrptomics explain in an introduction that all three works analogously, but that you are showing tidyseurat as an example.

@mikelove

mikelove commented Sep 1, 2026

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Thanks! I'll update soon.

how about something like

maybe without the word "ninja" though...

image

@stemangiola

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Thanks! I'll update soon.

how about something like

Ehehe why not! Looks fun

mikelove and others added 6 commits September 1, 2026 11:08
Groups content under 'Transcriptomics: tidyseurat, tidySCE and tidySE' and
'Genomics: plyranges' headers; adds intro explaining all three transcriptomics
packages work analogously with tidyseurat shown as example.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
@mikelove

mikelove commented Sep 4, 2026

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It took a while to catch some ANSI color codes that Seurat associated pkgs were emitting, despite options(crayon.enabled = FALSE) and cli.num_colors = 0.

This should be good to submit. @stemangiola I can just hit merge PR?

@stemangiola
stemangiola merged commit b5e7a36 into tidyomics:main Sep 6, 2026
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Thanks for contributing to the blog! ;)

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2 participants