Update spine-generic processing script to SCT 7.3 - #51

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valosekj wants to merge 8 commits into

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jv/update_process_data_spine-generic_to_sct73

Commits on May 12, 2026

use '-discfile' instead of '-vertfile' for sct_process_segmentation
valosekj
committed
4c01b70
Explicitly specify SCT version in the script description
valosekj
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ecd9bc7
Add '-anat' flag to sct_process_segmentation to compute spinal cord orientation (using HOG method).
valosekj
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a93dad0
typo
valosekj
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b3c2200
Add configuration file for processing spine-generic data
valosekj
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689a9ae
fix path in the config file
valosekj
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b32f034
Remove '-v 2' to make the sct_process_segmentation faster; context: https://github.com/spinalcordtoolbox/spinalcordtoolbox/issues/5223
valosekj
committed
a2a24cf

Commits on May 13, 2026

Add optional symmetry Dice metrics, multi-dataset comparison flags
valosekj
committed
4aa6346