Repositories list

• copick-shared-ui

  Public
  Shared Qt components and logic for chimerax-copick and napari-copick

  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•77 pull requests•Updated Sep 22, 2026Sep 22, 2026

• copick-mcp

  Public
  MCP-server for the copick CLI.

  annotationcurationcryoet+ 2

  annotationcurationcryoetai-agentmcp-server

  Python

  •

  MIT License

  •00 forks•00 stars•11 issue•22 pull requests•Updated Sep 21, 2026Sep 21, 2026

• copick-utils

  Public
  curationcryoet

  curationcryoet

  Python

  •

  MIT License

  •11 fork•22 stars•11 issue•33 pull requests•Updated Sep 21, 2026Sep 21, 2026

• copick-torch

  Public
  aimlsegmentation+ 1

  aimlsegmentationcryoet

  Python

  •

  MIT License

  •11 fork•11 star•22 issues•99 pull requests•Updated Sep 21, 2026Sep 21, 2026

• copick

  Public
  Definitions for a collaborative cryoET annotation tool.

  libraryaiannotation+ 3

  libraryaiannotationmlcollaborativecryoet

  Python

  •

  MIT License

  •77 forks•3535 stars•99 issues•2323 pull requests•Updated Sep 19, 2026Sep 19, 2026

• copick-easymode

  Public
  Copick integration for easymode.

  Python

  •

  GNU General Public License v3.0

  •00 forks•00 stars•66 issues•66 pull requests•Updated Sep 17, 2026Sep 17, 2026

• chimerax-copick

  Public
  A collaborative cryo-ET annotation tool

  visualizationannotationinteractive+ 2

  visualizationannotationinteractiveannotation-toolcryoet

  Python

  •

  MIT License

  •00 forks•44 stars•1010 issues•55 pull requests•Updated Aug 27, 2026Aug 27, 2026

• napari-copick

  Public
  A napari plugin for copick

  visualizationannotationinteractive+ 3

  visualizationannotationinteractivesegmentationannotation-toolcryoet

  Python

  •

  MIT License

  •11 fork•00 stars•77 issues•11 pull request•Updated Aug 19, 2026Aug 19, 2026

• copick-web

  Public
  Web viewer for copick.

  TypeScript

  •

  MIT License

  •00 forks•11 star•66 issues•44 pull requests•Updated Aug 18, 2026Aug 18, 2026

• .github

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Aug 10, 2026Aug 10, 2026

• copick-cpp

  Public
  A C++ port of copick.

  C++

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 15, 2026Jul 15, 2026

• copick.github.io

  Public
  HTML

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 26, 2026Jun 26, 2026

• copick-catalog

  Public
  Album solutions for copick.

  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 20, 2026Apr 20, 2026

• copick-plugin-demo

  Public
  Demo package for copick CLI plugins.

  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•44 pull requests•Updated Apr 20, 2026Apr 20, 2026

• copick-server

  Public
  Python

  •

  MIT License

  •22 forks•00 stars•00 issues•00 pull requests•Updated Nov 20, 2025Nov 20, 2025

• DeepFindET

  Public
  Segmentation of CryoET Tomograms for Particle Picking with 3D Convolutional Networks

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •88 forks•1212 stars•22 issues•00 pull requests•Updated Sep 10, 2024Sep 10, 2024

• copick_live

  Public
  A Dash Plotly server visualizing CZII ML Challenge Pickathon with live updates and analyses

  visualizationwebcopick

  visualizationwebcopick

  Python

  •

  MIT License

  •11 fork•33 stars•00 issues•11 pull request•Updated Jul 25, 2024Jul 25, 2024