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single-cell-analysis-utils

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utils for single-cell RNA seq data analysis; also contain cross validation solution in bulk-RNA seq data

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Name		Name	Last commit message	Last commit date
pyUCell		pyUCell
visulize_utils		visulize_utils
.gitignore		.gitignore
README.md		README.md
__init__.py		__init__.py
_config.py		_config.py
ccle.py		ccle.py
data.py		data.py
quality_control.R		quality_control.R
quality_control.py		quality_control.py
regulatory_utils.py		regulatory_utils.py
run_garnett.R		run_garnett.R
run_garnett.py		run_garnett.py
run_monocyle.R		run_monocyle.R
run_spacet.R		run_spacet.R
spatial_deconv.py		spatial_deconv.py
spg_clustering.py		spg_clustering.py
survival.py		survival.py
tcga.py		tcga.py
toci.py		toci.py

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single-cell-analysis-utils

pyUcell is modified from the original pyUCell repo (https://github.com/erguntiryaki/pyUCell).

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utils for single-cell RNA seq data analysis; also contain cross validation solution in bulk-RNA seq data

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