GitHub - gilsonauerswald/Bioinformatic_Projects

Name		Name	Last commit message	Last commit date
C7_L8_Principle_component_analysis_and_t_SNE.ipynb		C7_L8_Principle_component_analysis_and_t_SNE.ipynb
LDA,_SVM_and_RF_in_Python.ipynb		LDA,_SVM_and_RF_in_Python.ipynb
Lesson_3.ipynb		Lesson_3.ipynb
Lesson_4.ipynb		Lesson_4.ipynb
Molecular_Docking_COVID_19_Main_Protease_with_Curcumin.ipynb		Molecular_Docking_COVID_19_Main_Protease_with_Curcumin.ipynb
N_integration_across_multiple_`omics_data_sets_with_DIABLO_.ipynb		N_integration_across_multiple_`omics_data_sets_with_DIABLO_.ipynb
P_integration_across_independent_studies_with_MINT.ipynb		P_integration_across_independent_studies_with_MINT.ipynb
Phylogenetic_Analysis.ipynb		Phylogenetic_Analysis.ipynb
Project_3_Principle_component_analysis.ipynb		Project_3_Principle_component_analysis.ipynb
Python_C1_03_Reading_DNA_using_Python.ipynb		Python_C1_03_Reading_DNA_using_Python.ipynb
Python_C1_04_DNA_Replication_and_Reverse_Complements_in_Python.ipynb		Python_C1_04_DNA_Replication_and_Reverse_Complements_in_Python.ipynb
Python_C2_01_Loading_Data.ipynb		Python_C2_01_Loading_Data.ipynb
Python_C2_02_Data_Wrangling_and_Visualization.ipynb		Python_C2_02_Data_Wrangling_and_Visualization.ipynb
Python_C2_03_Descriptive_Statistics.ipynb		Python_C2_03_Descriptive_Statistics.ipynb
Python_C2_04_Dimensionality_reduction_Methods_PCA,_MDS,_NMDS.ipynb		Python_C2_04_Dimensionality_reduction_Methods_PCA,_MDS,_NMDS.ipynb
Python_C2_05_Clustering_Methods.ipynb		Python_C2_05_Clustering_Methods.ipynb
Python_C2_06_Machine_Learning_Classification.ipynb		Python_C2_06_Machine_Learning_Classification.ipynb
Python_C2_07_Data_visualization_using_UMAP.ipynb		Python_C2_07_Data_visualization_using_UMAP.ipynb
Python_C2_09_Predictive_Models_with_Deep_Learning.ipynb		Python_C2_09_Predictive_Models_with_Deep_Learning.ipynb
Python_C2_10_2D_&_3D_Scatterplot_Interactive_Plotly.ipynb		Python_C2_10_2D_&_3D_Scatterplot_Interactive_Plotly.ipynb
Python_C2_11_Boxplot,_Volcano_Plot,_Heatmap,_Line_Graph_Interactive_Plotly.ipynb		Python_C2_11_Boxplot,_Volcano_Plot,_Heatmap,_Line_Graph_Interactive_Plotly.ipynb
Python_C2_12_T_Test_and_Heatmap_Results_in_Python.ipynb		Python_C2_12_T_Test_and_Heatmap_Results_in_Python.ipynb
R_01_Working_with_DNA_Sequences_in_R.ipynb		R_01_Working_with_DNA_Sequences_in_R.ipynb
R_02_DNA_Replication_and_Reverse_Complements_in_R_.ipynb		R_02_DNA_Replication_and_Reverse_Complements_in_R_.ipynb
R_04_Multiple_Sequence_Alignment_visualizing_and_filtering_alignment.ipynb		R_04_Multiple_Sequence_Alignment_visualizing_and_filtering_alignment.ipynb
R_05_Advanced_analysis_of_VCF_files_Quality_control,_Filter_and_visualize_the_genomic_variants.ipynb		R_05_Advanced_analysis_of_VCF_files_Quality_control,_Filter_and_visualize_the_genomic_variants.ipynb
R_06_Advanced_analysis_of_VCF_files_Quality_control,_Filter_and_visualize_the_genomic_variants.ipynb		R_06_Advanced_analysis_of_VCF_files_Quality_control,_Filter_and_visualize_the_genomic_variants.ipynb
R_C2_L01_How_to_load_data_and_check_for_variable_data.ipynb		R_C2_L01_How_to_load_data_and_check_for_variable_data.ipynb
R_C2_L02_Data_Processing_&_Visualization.ipynb		R_C2_L02_Data_Processing_&_Visualization.ipynb
R_C2_L04_Dimensionality_reduction_PCA_&_visualization.ipynb		R_C2_L04_Dimensionality_reduction_PCA_&_visualization.ipynb
R_C2_L10_Advanced_Supervised_Machine_Learning.ipynb		R_C2_L10_Advanced_Supervised_Machine_Learning.ipynb
R_C2_L3_Advanced_Data_Visualization.ipynb		R_C2_L3_Advanced_Data_Visualization.ipynb
R_C2_L5_Data_visualization_using_t_SNE.ipynb		R_C2_L5_Data_visualization_using_t_SNE.ipynb
R_C2_L6_Statistical_Analysis_Tests_.ipynb		R_C2_L6_Statistical_Analysis_Tests_.ipynb
R_C2_L7_Differential_Gene_Expression.ipynb		R_C2_L7_Differential_Gene_Expression.ipynb
R_C2_L8_Clustering_K_means_&_Hierachical_clustering.ipynb		R_C2_L8_Clustering_K_means_&_Hierachical_clustering.ipynb
R_C2_L9_Classification_RF.ipynb		R_C2_L9_Classification_RF.ipynb
Sequence_to_Structure_–_Protein_Structure_Prediction.ipynb		Sequence_to_Structure_–_Protein_Structure_Prediction.ipynb
Single_cell_analysis.ipynb		Single_cell_analysis.ipynb
Single_cell_samples_integration_tutorial.ipynb		Single_cell_samples_integration_tutorial.ipynb
Structure_Preparation_and_Advanced_Visualization.ipynb		Structure_Preparation_and_Advanced_Visualization.ipynb
TCGA_Lesson_5_N_integration_with_DIABLO_.ipynb		TCGA_Lesson_5_N_integration_with_DIABLO_.ipynb
Transcriptomic_Data_Analysis_in_R.ipynb		Transcriptomic_Data_Analysis_in_R.ipynb
Tutorial: Download de Arquivos FASTQ de Bancos Públicos e Análise no Galaxy.md		Tutorial: Download de Arquivos FASTQ de Bancos Públicos e Análise no Galaxy.md

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