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update to use taxtastic 0.10.0

Status: Open.

#74 In fhcrc/deenurp;

· nhoffman opened on May 11, 2023

python3 support

Status: Open.

#70 In fhcrc/deenurp;

· nhoffman opened on Apr 22, 2021

filter_outliers should retain outlier alleles if other alleles are not outliers

Status: Open.

#69 In fhcrc/deenurp;

· nhoffman opened on Jul 31, 2019

filter_outliers fails with a strange message of a missing file

enhancement

Status: Open.

#64 In fhcrc/deenurp;

· ralsallaq opened on Jul 24, 2018

iterative filtering in filter_outliers

Status: Open.

#63 In fhcrc/deenurp;

· nhoffman opened on Apr 9, 2018

externally-defined criteria for keeping/dropping records

Status: Open.

#57 In fhcrc/deenurp;

· nhoffman opened on Jan 5, 2017

add subcommand to dereplicate reference seqs

enhancement

Status: Open.

#54 In fhcrc/deenurp;

· nhoffman opened on Apr 22, 2016

filter_outliers: deduplicate sequences as part of filtering operation

Status: Open.

#48 In fhcrc/deenurp;

· nhoffman opened on Feb 20, 2016

faster fill_lonely

Status: Open.

#37 In fhcrc/deenurp;

· nhoffman opened on Oct 12, 2015

pairwise_distances fails for some sequence names

bug

Status: Open.

#17 In fhcrc/deenurp;

· tyleraland opened on Jan 6, 2015

aligner choice in filter-outliers

Status: Open.

#15 In fhcrc/deenurp;

· nhoffman opened on Nov 18, 2014

search-sequences falls back to top hit if no matches above --select-threshold

enhancement

Status: Open.

#13 In fhcrc/deenurp;

· crosenth opened on Jul 21, 2014