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  1. orbit orbit Public

    O(r)-space Bitpacked Move Structures for Runny Permutations

    C++ 6 1

  2. kebab kebab Public

    KeBaB: k-mer based breaking for finding long maximal exact matches

    C++ 2

  3. col-bwt col-bwt Public

    Pangenomic index computing pseudo matching lengths and chain staistics, supporting seed chaining in linear time with respect to query length.

    C++

  4. r-index-f r-index-f Public

    R-Index-F Library for Pattern Matching

    C++ 12 1

  5. mohsenzakeri/Movi mohsenzakeri/Movi Public

    Fast, Cache-Efficient, and Scalable Queries on Pangenomes

    C++ 46 7

  6. ucfcbb/TeraTools ucfcbb/TeraTools Public

    TeraTools: Terabase scale pangenome analysis tools

    C++ 10 3