lofreq 2.1.5 - #2253

Process completed with exit code 1.

install failed

!! self.initialize_options() warning: build_py: byte-compiling is disabled, skipping. error: could not create '/home/linuxbrew/.linuxbrew/lib/python3.14/site-packages/lofreq_star': Read-only file system make[3]: *** [Makefile:463: install-exec-hook] Error 1 make[3]: Leaving directory '/var/tmp/lofreq-20260711-2-h75ie8/lofreq-2.1.5/src/tools' make[2]: *** [Makefile:402: install-exec-am] Error 2 make[2]: Leaving directory '/var/tmp/lofreq-20260711-2-h75ie8/lofreq-2.1.5/src/tools' make[1]: *** [Makefile:350: install-am] Error 2 make[1]: Leaving directory '/var/tmp/lofreq-20260711-2-h75ie8/lofreq-2.1.5/src/tools' make: *** [Makefile:383: install-recursive] Error 1 ==> Formula Tap: brewsci/bio Path: /home/linuxbrew/.linuxbrew/Homebrew/Library/Taps/brewsci/homebrew-bio/Formula/lofreq.rb ==> Configuration HOMEBREW_VERSION: 6.0.9-112-g34c40c1 ORIGIN: https://github.com/Homebrew/brew HEAD: 34c40c18ffa2029b611b61c73273e32c003d0842 Last commit: 4 hours ago Branch: main Core tap: N/A HOMEBREW_PREFIX: /home/linuxbrew/.linuxbrew HOMEBREW_CACHE: /home/runner/.cache/Homebrew HOMEBREW_CASK_OPTS: [] HOMEBREW_CLEANUP_PERIODIC_FULL_DAYS: 3650 HOMEBREW_COLOR: set HOMEBREW_CURL_PATH: /usr/bin/curl HOMEBREW_DOWNLOAD_CONCURRENCY: 8 HOMEBREW_FAIL_LOG_LINES: 150 HOMEBREW_FORBID_PACKAGES_FROM_PATHS: set HOMEBREW_FORCE_VENDOR_RUBY: set HOMEBREW_GITHUB_API_TOKEN: set HOMEBREW_GIT_EMAIL: 1589480+BrewTestBot@users.noreply.github.com HOMEBREW_GIT_NAME: BrewTestBot HOMEBREW_GIT_PATH: /usr/bin/git HOMEBREW_LOGS: /home/runner/work/homebrew-bio/homebrew-bio/logs HOMEBREW_MAKE_JOBS: 4 HOMEBREW_NO_ANALYTICS: set HOMEBREW_NO_AUTO_UPDATE: set HOMEBREW_NO_EMOJI: set HOMEBREW_NO_ENV_HINTS: set HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK: set HOMEBREW_NO_INSTALL_CLEANUP: set HOMEBREW_REQUIRE_TAP_TRUST: set HOMEBREW_SORBET_RUNTIME: set Homebrew Ruby: 4.0.5 => /home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/vendor/portable-ruby/4.0.5_1/bin/ruby CPU: quad-core 64-bit zen3 Clang: 18.1.3 Git: 2.54.0 => /usr/bin/git Curl: 8.5.0 => /usr/bin/curl Kernel: Linux 6.17.0-1018-azure x86_64 GNU/Linux OS: Ubuntu 24.04.4 LTS (noble) Host glibc: 2.39 Host libstdc++: 6.0.33 /usr/bin/gcc-13: 13.3.0 /usr/bin/ruby: 3.2.3 glibc: N/A gcc@13: N/A gcc: N/A xorg: N/A ==> ENV CC: gcc CXX: g++ OBJC: gcc OBJCXX: g++ HOMEBREW_CC: gcc-13 MAKEFLAGS: -j4 CMAKE_PREFIX_PATH: /home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super:/home/linuxbrew/.linuxbrew/opt/zlib:/home/linuxbrew/.linuxbrew PKG_CONFIG_PATH: /home/linuxbrew/.linuxbrew/opt/libdeflate/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/xz/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/openssl@3/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/zlib-ng-compat/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/bzip2/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/brotli/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/libnghttp2/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/libnghttp3/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/libngtcp2/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/libidn2/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/libpsl/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/libssh2/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/lz4/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/zstd/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/keyutils/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/krb5/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/ncurses/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/readline/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/libxcrypt/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/sqlite/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/util-linux/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/cyrus-sasl/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/openldap/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/curl/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/htslib/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/mpdecimal/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/expat/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/libedit/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/libffi/lib/pkgconfig:/home/linuxbrew/.linuxbrew/opt/python@3.14/l

brewsci/bio/lofreq 2.1.5 did not build

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