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taxid_from_name support for common names

Status: Open.

#21 In apcamargo/taxopy;

· btski opened on Jun 1, 2026

Download taxdump to a temporary directory

Status: Open.

#19 In apcamargo/taxopy;

· apcamargo opened on Feb 13, 2025

Improve support for the "clade" rank

bugSomething isn't workingSomething isn't working

Status: Open.

#17 In apcamargo/taxopy;

· apcamargo opened on Aug 4, 2024

Add support to the new taxdump format

enhancementNew feature or requestNew feature or request

Status: Open.

#16 In apcamargo/taxopy;

· apcamargo opened on Aug 3, 2024

Supporting edge contraction

enhancementNew feature or requestNew feature or request

Status: Open.

#9 In apcamargo/taxopy;

· Midnighter opened on Aug 8, 2022

Add the option to download from taxdump_archive

Status: Open.

#8 In apcamargo/taxopy;

· apcamargo opened on Jun 3, 2022

Add a taxid2child attribute to the TaxDb class

enhancementNew feature or requestNew feature or request

Status: Open.

#7 In apcamargo/taxopy;

· apcamargo opened on May 31, 2022

support synonym or equivalent name when calling taxid_from_name

enhancementNew feature or requestNew feature or request

Status: Open.

#5 In apcamargo/taxopy;

· ShannonDaddy opened on Dec 17, 2021

ExtractionError when running taxopy on several samples in parallel with specified dmp files and keep_files=True

Status: Open.

#1 In apcamargo/taxopy;

· dawnmy opened on Jan 30, 2021