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"Principles and applications of fisheries-independent surveys" is a 4-credit course (FISH 572) that delves into the importance of fisheries-independent surveys as a cornerstone for fisheries stock assessment and ecosystem research.

See this repository for coursework. The sibling repository https://github.com/afsc-gap-products/UW-FISH572 only houses the course website.

This code is primarily maintained by:

Emily Markowitz (Emily.Markowitz AT noaa.gov; @EmilyMarkowitz-NOAA)

Alaska Fisheries Science Center,

National Marine Fisheries Service,

National Oceanic and Atmospheric Administration,

Seattle, WA 98195

Lectures and exercises

The folder uw-survey-2026 contains the model-based lectures and exercise:

  1. Introduction to sdmTMB

  2. Combining surveys

  3. Exercise

Assignment

Develop your model-based and design-based analysis of simulated data, given this description and example of the assignment

Suggestions and Comments

If you see that the data, product, or metadata can be improved, you are invited to create a pull request, submit an issue to the GitHub organization, or submit an issue to the code’s repository.

NOAA README

This repository is a scientific product and is not official communication of the National Oceanic and Atmospheric Administration, or the United States Department of Commerce. All NOAA GitHub project code is provided on an ‘as is’ basis and the user assumes responsibility for its use. Any claims against the Department of Commerce or Department of Commerce bureaus stemming from the use of this GitHub project will be governed by all applicable Federal law. Any reference to specific commercial products, processes, or services by service mark, trademark, manufacturer, or otherwise, does not constitute or imply their endorsement, recommendation or favoring by the Department of Commerce. The Department of Commerce seal and logo, or the seal and logo of a DOC bureau, shall not be used in any manner to imply endorsement of any commercial product or activity by DOC or the United States Government.

NOAA License

Software code created by U.S. Government employees is not subject to copyright in the United States (17 U.S.C. §105). The United States/Department of Commerce reserve all rights to seek and obtain copyright protection in countries other than the United States for Software authored in its entirety by the Department of Commerce. To this end, the Department of Commerce hereby grants to Recipient a royalty-free, nonexclusive license to use, copy, and create derivative works of the Software outside of the United States.

NOAA Fisheries

U.S. Department of Commerce | National Oceanographic and Atmospheric Administration | NOAA Fisheries

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"Principles and applications of fisheries-independent surveys" is a 4-credit course (FISH 572) that delves into the importance of fisheries-independent surveys as a cornerstone for fisheries stock assessment and ecosystem research.

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