All issues

Search results

Michaelis-Menten and local function rate laws silently ignore the TotalRate flag

Status: Open.

#91 In RuleWorld/nfsim;

· wshlavacek opened on Aug 20, 2026

Rules that use TotalRate are scaled by the reaction center symmetry factor

Status: Open.

#90 In RuleWorld/nfsim;

· wshlavacek opened on Aug 20, 2026

A reaction rate that uses a Species observable stays frozen at its starting value

Status: Open.

#86 In RuleWorld/nfsim;

· wshlavacek opened on Jul 20, 2026

NFsim ignores t_start: nf time axis (and time()) starts at 0, inconsistent with run_network's -i

Status: Open.

#78 In RuleWorld/nfsim;

· wshlavacek opened on May 17, 2026

NFsim should support first-class in-process/library use

Status: Open.

#76 In RuleWorld/nfsim;

· wshlavacek opened on May 11, 2026

RuleMonkey 3.1.2 released — independent network-free simulator with 177-model parity test suite

Status: Open.

#66 In RuleWorld/nfsim;

· wshlavacek opened on May 2, 2026

-bscb appears to be required for reactant-side molecularity enforcement; -cb / complex=>1 is insufficient

Status: Open.

#51 In RuleWorld/nfsim;

· wshlavacek opened on Mar 25, 2026