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Achievement: YOLOAchievement: Public Sponsor

Achievements

Achievement: YOLOAchievement: Public Sponsor

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JHCCoder/README.md

Hi there 👋

⚡ I am interested in treating and preventing neurodegenerative diseases such as Alzheimer's disease (AD).

🔭 I am currently working on establishing alternative animal model for understanding and treating sporadic AD. I am approaching this problem through investigating the epigenetic regulation that underpins Alzheimer's disease (AD) via single cell multi-modal analysis.

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  1. genome-building-pipeline genome-building-pipeline Public

    This repository contains code for a denovo genome building pipeline involving genome assembly & scaffolding, as well as repeat masking and genome annotation.

    Jupyter Notebook

  2. SciKick SciKick Public

    My AI sidekick helping me through my PhD

    Python

  3. vertebrateGutSamples-microbiomeDiversity-analysis vertebrateGutSamples-microbiomeDiversity-analysis Public

    Analysis of vertebrate gut samples (3/4 wildlife) with focus on: 0) implementation of shogun & woltka for species level characterization of microbiome communities 1) microbiome alpha diversity 2) m…

    Jupyter Notebook

  4. vertebrateGutSamples-strainPhylosymbiosis-analysis vertebrateGutSamples-strainPhylosymbiosis-analysis Public

    Analysis of vertebrate gut samples (3/4 wildlife) with focus on: 0) custom implementation of BioBakery3 tools for optimal strain tree per bacteria 1) strain tree visualization 2) mantel spearman st…

    Jupyter Notebook