iqtree3 3.1.3

[BrewTestBot]

Created by brew bump

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Created with brew bump-formula-pr.

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release notes

## What's Changed
* huaiyan by @HuaiyanRen in https://github.com/iqtree/iqtree3/pull/180
* Alisim fixes by @trongnhanuit in https://github.com/iqtree/iqtree3/pull/185
* huaiyan by @HuaiyanRen in https://github.com/iqtree/iqtree3/pull/188
* Bug fix: stop using dangling ptrs and buildPattern() in fixPartitions() by @StefanFlaumberg in https://github.com/iqtree/iqtree3/pull/186
* PartitionFinder-mAIC improvement by @HuaiyanRen in https://github.com/iqtree/iqtree3/pull/202
* Fix AliSim crashing when using GHOST with a partitioned/mixed-datatype models by @trongnhanuit in https://github.com/iqtree/iqtree3/pull/191
* Bug fix: uniformly select indel positions across only non-gap sites by @trongnhanuit in https://github.com/iqtree/iqtree3/pull/197
* Mutsel implementation by @benjamin-lieser in https://github.com/iqtree/iqtree3/pull/193
* Error out when a partition model is combined with -fs/-ft instead of silently ignoring them by @ssolo in https://github.com/iqtree/iqtree3/pull/208
* Fix setRootNode() assertion when the -o outgroup is absent from a partition tree or a quartet tree (#203, #89) by @cindykrafft in https://github.com/iqtree/iqtree3/pull/207
* Use different memory thresholds for different platforms in ci workflow by @thomaskf in https://github.com/iqtree/iqtree3/pull/209
* use different thresholds for different platforms in time testing by @thomaskf in https://github.com/iqtree/iqtree3/pull/212
* Fix MutSel potential bugs related to alignment copying by @StefanFlaumberg in https://github.com/iqtree/iqtree3/pull/211
* Honour user-defined codon frequencies (+FU) for GY-type models by @cindykrafft in https://github.com/iqtree/iqtree3/pull/210
New Contributors

@benjamin-lieser made their first contribution in Mutsel implementation iqtree/iqtree3#193
@ssolo made their first contribution in Error out when a partition model is combined with -fs/-ft instead of silently ignoring them iqtree/iqtree3#208
@cindykrafft made their first contribution in Fix setRootNode() assertion when the -o outgroup is absent from a partition tree or a quartet tree (#203, #89) iqtree/iqtree3#207

Full Changelog: iqtree/iqtree3@v3.1.3...v3.1.4

View the full release notes at https://github.com/iqtree/iqtree3/releases/tag/v3.1.4.

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[chenrui333]

[daeho-ro]

I missed the version bump 🥲

[github-actions]

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