Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
Clinical-Genomics
/
microSALT
Public
Notifications
You must be signed in to change notification settings
Fork
3
Star
4
Code
Issues
17
Pull requests
4
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Actions
Projects
Security and quality
Insights
Actions: Clinical-Genomics/microSALT
Actions
All workflows
Workflows
Build and push production containers on release
Build and push production containers on release
Build and push staging containers
Build and push staging containers
Copilot
Copilot
Copilot code review
Copilot code review
Copilot coding agent
Copilot coding agent
Dependabot Updates
Dependabot Updates
Dependency Graph
Dependency Graph
Tests
Tests
Show more workflows...
Management
Caches
All workflows
All workflows
Actions
Loading...
Loading
Sorry, something went wrong.
Uh oh!
There was an error while loading.
Please reload this page
.
will be ignored since log searching is not yet available
Showing runs from all workflows
will be ignored since log searching is not yet available
278 workflow runs
278 workflow runs
Workflow
Filter by Workflow
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching workflows.
Event
Filter by Event
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching events.
Status
Filter by Status
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching statuses.
Branch
Filter by Branch
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching branches.
Actor
Filter by Actor
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching users.
Bump oauthlib from 3.3.1 to 4.0.0
Tests
#546:
Commit
ffddd7d
pushed by
dependabot
Bot
19s
dependabot/uv/oauthlib-4.0.0
dependabot/uv/oauthlib-4.0.0
19s
View #264
View workflow file
Bump urllib3 from 2.7.0 to 2.8.0
Tests
#545:
Commit
204a0b3
pushed by
dependabot
Bot
14s
dependabot/uv/urllib3-2.8.0
dependabot/uv/urllib3-2.8.0
14s
View #263
View workflow file
uv in /. for urllib3 - Update #1601345626
Dependabot Updates
#21:
by
dependabot
Bot
1m 5s
master
master
1m 5s
uv in /. for oauthlib - Update #1601345628
Dependabot Updates
#20:
by
dependabot
Bot
1m 13s
master
master
1m 13s
Bump soupsieve from 2.8.4 to 2.9
Tests
#544:
Commit
df0a62b
pushed by
dependabot
Bot
52s
dependabot/uv/soupsieve-2.9
dependabot/uv/soupsieve-2.9
52s
View #262
View workflow file
uv in /. for soupsieve - Update #1581184801
Dependabot Updates
#19:
by
dependabot
Bot
57s
master
master
57s
v5.0.3
Build and push production containers on release
#4:
Release
v5.0.3
created by
karlnyr
3m 5s
3m 5s
View workflow file
Merge pull request #260 from Clinical-Genomics/feat/trimmomatic-repor…
Tests
#543:
Commit
de4a06c
pushed by
karlnyr
21s
v5.0.3
v5.0.3
21s
View workflow file
Merge pull request #260 from Clinical-Genomics/feat/trimmomatic-repor…
Tests
#542:
Commit
de4a06c
pushed by
karlnyr
17s
master
master
17s
View workflow file
review
Tests
#541:
Commit
59ca172
pushed by
karlnyr
18s
feat/trimmomatic-report-and-parsing
feat/trimmomatic-report-and-parsing
18s
View #260
View workflow file
add scope of raw-data accreditation to alignment page
Tests
#540:
Commit
58c5dc8
pushed by
karlnyr
18s
feat/trimmomatic-report-and-parsing
feat/trimmomatic-report-and-parsing
18s
View workflow file
update report with thresholds and formatting.
Tests
#539:
Commit
5683979
pushed by
karlnyr
15s
feat/trimmomatic-report-and-parsing
feat/trimmomatic-report-and-parsing
15s
View workflow file
fix: replace stacked asterisk footnote markers with dagger symbols
Tests
#538:
Commit
5c78a63
pushed by
karlnyr
19s
feat/trimmomatic-report-and-parsing
feat/trimmomatic-report-and-parsing
19s
View workflow file
organise, format
Tests
#537:
Commit
48ad1c8
pushed by
karlnyr
21s
feat/trimmomatic-report-and-parsing
feat/trimmomatic-report-and-parsing
21s
View workflow file
order
Tests
#536:
Commit
62dc3e3
pushed by
karlnyr
28s
feat/trimmomatic-report-and-parsing
feat/trimmomatic-report-and-parsing
28s
View workflow file
feat: add raw read counts to alignment QC report
Tests
#535:
Commit
1875e3f
pushed by
karlnyr
26s
feat/trimmomatic-report-and-parsing
feat/trimmomatic-report-and-parsing
26s
View workflow file
version
Tests
#534:
Commit
9c2841c
pushed by
karlnyr
19s
rc5.0.3
rc5.0.3
19s
View #259
View workflow file
add laboratory summary, add swedac, add discretion in number of reads
Tests
#533:
Commit
c3235fe
pushed by
karlnyr
21s
rc5.0.3
rc5.0.3
21s
View workflow file
v5.0.2
Build and push production containers on release
#3:
Release
v5.0.2
created by
karlnyr
3m 13s
3m 13s
View workflow file
Merge pull request #258 from Clinical-Genomics/rc5.0.2
Tests
#532:
Commit
0df4cb0
pushed by
karlnyr
22s
v5.0.2
v5.0.2
22s
View workflow file
Merge pull request #258 from Clinical-Genomics/rc5.0.2
Tests
#531:
Commit
0df4cb0
pushed by
karlnyr
23s
master
master
23s
View workflow file
bump
Tests
#530:
Commit
963a803
pushed by
karlnyr
22s
rc5.0.2
rc5.0.2
22s
View #258
View workflow file
fix logger bug
Tests
#529:
Commit
0562f44
pushed by
karlnyr
24s
rc5.0.2
rc5.0.2
24s
View workflow file
Bump sh from 1.14.3 to 2.2.4
Tests
#528:
Commit
d319021
pushed by
dependabot
Bot
17s
dependabot/uv/sh-2.2.4
dependabot/uv/sh-2.2.4
17s
View #256
View workflow file
uv in /. for sh - Update #1535108208
Dependabot Updates
#18:
by
dependabot
Bot
1m 13s
master
master
1m 13s
Previous
1
2
3
4
5
…
11
12
Next
You can’t perform that action at this time.