Chain PEtab v2 experiment periods natively in the JAX simulator - #3198
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FFroehlich wants to merge 43 commits into
Draft
Chain PEtab v2 experiment periods natively in the JAX simulator#3198FFroehlich wants to merge 43 commits into
FFroehlich wants to merge 43 commits into
Codecov / codecov/project
succeeded
Aug 10, 2026 in 1s
79.11% (+0.49%) compared to 3aebbe8
View this Pull Request on Codecov
79.11% (+0.49%) compared to 3aebbe8
Details
Codecov Report
❌ Patch coverage is 97.40260% with 12 lines in your changes missing coverage. Please review.
✅ Project coverage is 79.11%. Comparing base (3aebbe8) to head (3a9316e).
Additional details and impacted files
@@ Coverage Diff @@
## main #3198 +/- ##
==========================================
+ Coverage 78.62% 79.11% +0.49%
==========================================
Files 318 319 +1
Lines 21102 21743 +641
Branches 1487 1488 +1
==========================================
+ Hits 16591 17202 +611
- Misses 4503 4533 +30
Partials 8 8 | Files with missing lines | Coverage Δ | |
|---|---|---|
| python/sdist/amici/exporters/jax/ode_export.py | 93.12% <100.00%> (+2.12%) |
⬆️ |
| ...on/sdist/amici/importers/petab/v1/_petab_import.py | 52.94% <100.00%> (+14.47%) |
⬆️ |
| ...hon/sdist/amici/importers/petab/v1/_sbml_import.py | 97.75% <ø> (ø) |
|
| python/sdist/amici/importers/sbml/__init__.py | 94.43% <ø> (ø) |
|
| python/sdist/amici/sim/jax/_simulation.py | 97.87% <100.00%> (ø) |
|
| python/sdist/amici/sim/jax/petab.py | 92.97% <ø> (+1.52%) |
⬆️ |
| ...hon/sdist/amici/importers/petab/_petab_importer.py | 88.34% <94.11%> (-0.39%) |
⬇️ |
| python/tests/petab_/test_petab_v2_multiperiod.py | 99.62% <99.62%> (ø) |
|
| python/sdist/amici/sim/jax/model.py | 89.32% <93.00%> (+1.28%) |
⬆️ |
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