ci: refresh sdist consumer checks against current main

Assisted-by: Codex:GPT-6

Author: d-v-b

.github/workflows/check_changelogs.yml

@@ -22,7 +22,7 @@ jobs:
           persist-credentials: false
 
       - name: Install uv
-        uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
+        uses: astral-sh/setup-uv@20cfd1bf945f4377ade1205e4dbc17946fc9a30d # v10.0.1
 
       - name: Check zarr-python changelog entries
         run: uv run --no-sync python ci/check_changelog_entries.py

.github/workflows/codspeed.yml

@@ -28,11 +28,11 @@ jobs:
         fetch-depth: 0
         persist-credentials: false
     - name: Install Hatch
-      uses: pypa/hatch@257e27e51a6a5616ed08a39a408a21c35c9931bc
+      uses: pypa/hatch@f647ed70d49adb885f53a27d1c7f5bdaeacf2c60
       with:
         version: '1.16.5'
     - name: Run the benchmarks
-      uses: CodSpeedHQ/action@0ca9cbbf4623b599a6c3ed4fc8a922942705d9f1 # v5.0.2
+      uses: CodSpeedHQ/action@373d6868929f444bc08d901fd0eb0ad52a8875ea # v5.2.1
       env:
         ZARR_BENCHMARK_CLEAR_CACHE: '1'
       with:

.github/workflows/docs.yml

@@ -22,7 +22,7 @@ jobs:
       - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
         with:
           persist-credentials: false
-      - uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
+      - uses: astral-sh/setup-uv@20cfd1bf945f4377ade1205e4dbc17946fc9a30d # v10.0.1
       - run: uv sync --group docs
       # Fast source-level guards that need no built site, so they run before the (slower)
       # build for a quick failure: every public export is in the API reference, and no

.github/workflows/downstream.yml

@@ -45,7 +45,7 @@ jobs:
           python-version: '3.13'
 
       - name: Install uv
-        uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
+        uses: astral-sh/setup-uv@20cfd1bf945f4377ade1205e4dbc17946fc9a30d # v10.0.1
 
       - name: Install xarray and test dependencies
         working-directory: xarray
@@ -102,7 +102,7 @@ jobs:
           python-version: '3.13'
 
       - name: Install uv
-        uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
+        uses: astral-sh/setup-uv@20cfd1bf945f4377ade1205e4dbc17946fc9a30d # v10.0.1
 
       - name: Install numcodecs with test-zarr-main group
         working-directory: numcodecs

.github/workflows/gpu_test.yml

@@ -62,9 +62,9 @@ jobs:
         python-version: ${{ matrix.python-version }}
         cache: 'pip'
     - name: Install uv
-      uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
+      uses: astral-sh/setup-uv@20cfd1bf945f4377ade1205e4dbc17946fc9a30d # v10.0.1
     - name: Install Hatch
-      uses: pypa/hatch@257e27e51a6a5616ed08a39a408a21c35c9931bc
+      uses: pypa/hatch@f647ed70d49adb885f53a27d1c7f5bdaeacf2c60
       with:
         version: '1.16.5'
     - name: Set Up Hatch Env

.github/workflows/hypothesis.yaml

@@ -25,6 +25,9 @@ jobs:
 
   hypothesis:
     name: Slow Hypothesis Tests
+    permissions:
+      contents: read
+      issues: write
     environment:
       name: codecov-upload
       deployment: false
@@ -57,9 +60,9 @@ jobs:
         python-version: ${{ matrix.python-version }}
         cache: 'pip'
     - name: Install uv
-      uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
+      uses: astral-sh/setup-uv@20cfd1bf945f4377ade1205e4dbc17946fc9a30d # v10.0.1
     - name: Install Hatch
-      uses: pypa/hatch@257e27e51a6a5616ed08a39a408a21c35c9931bc
+      uses: pypa/hatch@f647ed70d49adb885f53a27d1c7f5bdaeacf2c60
       with:
         version: '1.16.5'
     - name: Set Up Hatch Env
@@ -83,6 +86,7 @@ jobs:
       id: status
       env:
         HATCH_ENV: test.py${{ matrix.python-version }}-${{ matrix.dependency-set }}
+        PYTEST_ADDOPTS: "--report-log=output-${{ matrix.python-version }}-log.jsonl"
       run: |
         echo "Using Hypothesis profile: $HYPOTHESIS_PROFILE"
         hatch env run --env "$HATCH_ENV" run-hypothesis
@@ -113,4 +117,4 @@ jobs:
       with:
         log-path: output-${{ matrix.python-version }}-log.jsonl
         issue-title: "Nightly Hypothesis tests failed"
-        issue-label: "topic-hypothesis"
+        issue-label: "automated issue"

.github/workflows/issue-metrics.yml

@@ -33,7 +33,7 @@ jobs:
         echo "last_month=$first_day..$last_day" >> "$GITHUB_ENV"
 
     - name: Run issue-metrics tool
-      uses: github-community-projects/issue-metrics@df8c49d20958f9345281fa2124858bd0ad227e1f # v5.0.0
+      uses: github-community-projects/issue-metrics@61084fa9599a62c7821f06602e180a42d1c7a205 # v5.0.1
       env:
         GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
         SEARCH_QUERY: 'repo:zarr-developers/zarr-python is:issue created:${{ env.last_month }} -reason:"not planned"'

.github/workflows/lint.yml

@@ -27,7 +27,7 @@ jobs:
         with:
           python-version: "3.12"
       - name: Install uv
-        uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0
+        uses: astral-sh/setup-uv@20cfd1bf945f4377ade1205e4dbc17946fc9a30d # v10.0.1
         with:
           enable-cache: true
       - uses: j178/prek-action@4e14d07f9231acabce116ccfca13b13dd9755ece # v3.0.0

.github/workflows/nightly_wheels.yml

@@ -34,7 +34,7 @@ jobs:
           python-version: '3.14'
 
       - name: Install Hatch
-        uses: pypa/hatch@257e27e51a6a5616ed08a39a408a21c35c9931bc
+        uses: pypa/hatch@f647ed70d49adb885f53a27d1c7f5bdaeacf2c60
         with:
           version: '1.16.5'
 

.github/workflows/releases.yml

@@ -38,7 +38,7 @@ jobs:
           python-version: '3.12'
 
       - name: Install Hatch
-        uses: pypa/hatch@257e27e51a6a5616ed08a39a408a21c35c9931bc
+        uses: pypa/hatch@f647ed70d49adb885f53a27d1c7f5bdaeacf2c60
         with:
           version: '1.16.5'
       - name: Build wheel and sdist