fix: mandate file:// url for Bruker data, convert back to local path … #448
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| name: Rust | |
| on: | |
| push: | |
| branches: [ "master" ] | |
| pull_request: | |
| branches: [ "master" ] | |
| env: | |
| CARGO_TERM_COLOR: always | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Build | |
| run: cargo build --verbose | |
| - name: Run tests | |
| run: cargo test --verbose | |
| - name: Run VAT1_HUMAN search | |
| run: cargo run tests/config.json | |
| - name: Run with CLI args | |
| run: | | |
| cargo run -- \ | |
| -f tests/Q99536.fasta \ | |
| -o foo \ | |
| --annotate-matches \ | |
| --write-pin \ | |
| --disable-telemetry-i-dont-want-to-improve-sage \ | |
| tests/config-cli.json \ | |
| tests/*.mzML |