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coot 1.3.2

coot 1.3.2 #3438

Triggered via pull request August 11, 2026 09:20
Status Failure
Total duration 58m 47s
Artifacts 3

build-bottles.yml

on: pull_request
Matrix: build-bottles
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4 errors and 1 warning
build-bottles (macos-14)
Process completed with exit code 1.
build-bottles (macos-14)
install failed
`brew install --verbose --formula --build-bottle brewsci/bio/coot` failed on macOS Sonoma (14) on Apple Silicon!: Formula/coot.rb#L92
libtool: compile: clang++ -DPACKAGE_NAME=\"coot\" -DPACKAGE_TARNAME=\"coot\" -DPACKAGE_VERSION=\"1.3.2\" "-DPACKAGE_STRING=\"coot 1.3.2\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"coot\" -DVERSION=\"1.3.2\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_CXX11=1 -DHAVE_CXX_THREAD=1 -DHAVE_LIBM=1 -DHAVE_LIBGSLCBLAS=1 -DHAVE_LIBGSL=1 -DHAVE_PYTHON=\"3.14\" "-DHAVE_BOOST=/**/" "-DHAVE_BOOST_THREAD=/**/" "-DHAVE_BOOST_PYTHON=/**/" -DHAVE_RSVG=1 -DHAVE_NETCDF=1 -I. -DUSE_PYTHON -I/opt/homebrew/Cellar/gtk4/4.22.4/include/gtk-4.0 -I/opt/homebrew/Cellar/pango/1.58.2/include/pango-1.0 -I/opt/homebrew/Cellar/fribidi/1.0.16/include/fribidi -I/opt/homebrew/Cellar/libthai/0.1.30/include -I/opt/homebrew/Cellar/libdatrie/0.2.14/include -I/opt/homebrew/Cellar/harfbuzz/14.3.0/include/harfbuzz -I/opt/homebrew/opt/graphite2/include -I/opt/homebrew/include/gdk-pixbuf-2.0 -I/opt/homebrew/opt/libtiff/include -I/opt/homebrew/opt/webp/include -I/opt/homebrew/opt/webp/include/webp -I/opt/homebrew/opt/zstd/include -I/opt/homebrew/Cellar/xz/5.8.3/include -I/opt/homebrew/opt/jpeg-turbo/include -I/opt/homebrew/Cellar/cairo/1.18.4/include/cairo -I/opt/homebrew/Cellar/fontconfig/2.18.3/include -I/opt/homebrew/Cellar/expat/2.8.3/include -I/opt/homebrew/opt/freetype/include/freetype2 -I/opt/homebrew/opt/libpng/include/libpng16 -I/opt/homebrew/Cellar/libxext/1.3.7/include -I/opt/homebrew/Cellar/xorgproto/2025.1/include -I/opt/homebrew/Cellar/libxrender/0.9.12/include -I/opt/homebrew/Cellar/libx11/1.8.13/include -I/opt/homebrew/Cellar/libxcb/1.17.0/include -I/opt/homebrew/Cellar/libxau/1.0.12/include -I/opt/homebrew/Cellar/libxdmcp/1.1.5/include -I/opt/homebrew/Cellar/pixman/0.46.4/include/pixman-1 -I/opt/homebrew/Cellar/graphene/1.10.8/include/graphene-1.0 -I/opt/homebrew/Cellar/graphene/1.10.8/lib/graphene-1.0/include -I/opt/homebrew/Cellar/glib/2.88.3/include -I/Library/Developer/CommandLineTools/SDKs/MacOSX14.sdk/usr/include/ffi -I/opt/homebrew/Cellar/glib/2.88.3/include/glib-2.0 -I/opt/homebrew/Cellar/glib/2.88.3/lib/glib-2.0/include -I/opt/homebrew/opt/gettext/include -I/opt/homebrew/Cellar/pcre2/10.47_1/include -I/opt/homebrew/opt/zlib-ng-compat/include -DWITH_GZFILEOP -I.. -I/opt/homebrew/opt/rdkit/include/rdkit -DRDKIT_HAS_CAIRO_SUPPORT -I/opt/homebrew/Cellar/eigen/5.0.1/include/eigen3 -pthread -I/opt/homebrew/opt/boost/include -DMAKE_ENHANCED_LIGAND_TOOLS -I/opt/homebrew/opt/glm/include -DHAVE_SYS_STDTYPES_H=0 -DUSE_MOLECULES_TO_TRIANGLES -I/opt/homebrew/Cellar/ssm/1.4_2/include -I/opt/homebrew/Cellar/mmdb2/2.0.22/include -DHAVE_SSMLIB -I/opt/homebrew/Cellar/mmdb2/2.0.22/include -DMMDB_HAS_LINK_DISTANCE -I/opt/homebrew/Cellar/gsl/2.8/include -I/opt/homebrew/Cellar/clipper4coot/2.1.20180802_3/include -D_THREAD_SAFE -pthread -I/opt/homebrew/Cellar/libccp4/8.0.0/include -I/opt/homebrew/Cellar/mmdb2/2.0.22/include -DCLIPPER_HAS_TOP8000 -I/opt/homebrew/Cellar/libvorbis/1.3.7/include -I/opt/homebrew/Cellar/libogg/1.3.6/include -DWITH_SOUND -DUSE_SQLITE3 -I/opt/homebrew/opt/sqlite/include -I/opt/homebrew/opt/gemmi/include -DUSE_GEMMI=1 -DUSE_BACKWARD -I/opt/homebrew/Cellar/vte3/0.84.1/include/vte-2.91-gtk4 -I/opt/homebrew/Cellar/gtk4/4.22.4/include/gtk-4.0 -I/opt/homebrew/Cellar/pango/1.58.2/include/pango-1.0 -I/opt/homebrew/Cellar/fribidi/1.0.16/include/fribidi -I/opt/homebrew/Cellar/libthai/0.1.30/include -I/opt/homebrew/Cellar/libdatrie/0.2.14/include -I/opt/homebrew/Cellar/harfbuzz/14.3.0/include/harfbuzz -I/opt/homebrew/opt/graphite2/include -I/opt/homebrew/include/gdk-pixbuf-2.0 -I/opt/homebrew/opt/libtiff/include -I/opt/homebrew/opt/webp/include -I/opt/homebrew/opt/webp/include/webp -I/opt/homebrew/opt/zstd/include -I/opt/homebrew/Cellar/xz/5.8.3/include -I/opt/homebrew/opt/jpeg-turbo/include -I/opt/homebrew/Cellar/cairo/1.18.4/include/cairo -I/opt/homebrew/Cellar/fontconfig/2.18.3/include -I/opt/homebrew/Cellar/expat/2.8.3/include -I/opt/homebrew/
build-bottles (macos-14)
brewsci/bio/coot 1.3.2 did not build
build-bottles (macos-14)
No files were found with the provided path: *.bottle.*. No artifacts will be uploaded.

Artifacts

Produced during runtime
Name Size Digest
bottles-macos-15
86.4 MB
sha256:75c129460cbe5f8e6eb3c514e4a63d3124cdd12ffc236b3e4997778100c54051
bottles-macos-26
86 MB
sha256:e02000a8cf28776aa552eb20756c1ef739b356a8a55937e737879d6b4367af1f
bottles-ubuntu-latest
96.1 MB
sha256:b90c6e56753442b498a93989c705b99f7996a6ee9cebcc0a10c230e1b159c4f7