diff --git a/alphabase/constants/const_files/pg_reader.yaml b/alphabase/constants/const_files/pg_reader.yaml
index 8b4942a8..9d86db1e 100644
--- a/alphabase/constants/const_files/pg_reader.yaml
+++ b/alphabase/constants/const_files/pg_reader.yaml
@@ -34,3 +34,87 @@ diann:
     "peptide_count": "N.Sequences" # DIANN 2.1
     "proteotypic_peptide_count": "N.Proteotypic.Sequences" # DIANN 2.1
   measurement_regex: null
+
+
+# Based on alphapept 0.5.6
+alphapept:
+  reader_type: "alphapept"
+  # Mapping is performed by _pre_process function, so the columns are already standardized
+  column_mapping:
+    "proteins": "proteins"
+    "uniprot_ids": "uniprot_ids"
+    "ensembl_ids": "ensembl_ids"
+    "source_db": "source_db"
+    "is_decoy": "is_decoy"
+  # Match raw intensities per default.
+  # Match everything at the start but not a trailing LFQ
+  measurement_regex:
+    # Match anything at the start "^.*" but assure that it does not "(?<!...)" match "_LFQ" the end ($)
+    # _LFQ is the marker for LFQ runs in alphapept
+    raw: "^.*(?<!_LFQ)$"
+    # Match "_LFQ" at the end of the name
+    lfq: "_LFQ$"
+
+
+# Published June 27, 2024
+# https://cox-labs.github.io/coxdocs/output_tables.html#protein-groups
+maxquant:
+  reader_type: "maxquant"
+  column_mapping:
+    "proteins": "Protein names"
+    "uniprot_ids": "Protein IDs"
+    "genes": "Gene names"
+    "is_decoy": "Reverse"
+  measurement_regex:
+    # Match "Intensity <sample>"
+    # Do not match "Intensity" (sum across all samples)
+    # Do not match "Intensity L <sample>" (or M/H), from TMT experiments
+    "raw": "^Intensity(?!\\s[LHM]\\s).+$" # Raw intensity-based quantification
+    "lfq": "^LFQ intensity(?!\\s[LHM]\\s).+$" # LFQ intensity-based quantification
+    "ibaq": "^iBAQ(?!\\s[LHM]\\s).+$" # Intensity-Based Absolute Quantification
+
+
+# Based on Spectronaut 20.0 Run Pivot Report (Page 80/81)
+# https://biognosys.com/content/uploads/2025/06/Spectronaut-20-Manual.pdf
+spectronaut:
+  reader_type: "spectronaut"
+  column_mapping:
+    "proteins": ["PG.ProteinNames", "PG_ProteinGroups"]
+    "genes": "PG.Genes"
+    "uniprot_ids": "PG.UniProtIds"
+  measurement_regex:
+    # Spectronaut marks sample columns with "[number]..."
+    # At the beginning (^) of the string, match open square bracket "\\[", any number of digits "[0-9]+", closed square bracket "\\]"
+    # Square brackets are special characters -> need to be escaped with "\[". The backslash itself needs to be escaped -> "\\["
+    "default": "^\\[[0-9]+\\]"
+
+
+# https://fragpipe.nesvilab.org/docs/tutorial_fragpipe_outputs.html#proteintsv
+fragpipe:
+  reader_type: "fragpipe"
+  column_mapping:
+    "proteins": "Entry Name"
+    "uniprot_ids": "Protein ID"
+    "genes": "Gene Names"
+    "description": "Description"
+  measurement_regex:
+    "raw": "Intensity$"
+    "razor": "Razor Intensity$"
+    "unique": "Unique Intensity$"
+    "total": "Total Intensity$"
+    "lfq": "MaxLFQ Intensity$"
+    "lfq_unique": "MaxLFQ Unique Intensity$"
+    "lfq_total": "MaxLFQ Total Intensity$"
+
+
+# mzTab
+# version 2.0.0 (2019-03)
+mztab:
+  reader_type: "mztab"
+  column_mapping:
+    "uniprot_ids": "accession"
+    "description": "description"
+    "source_db": "database"
+  measurement_regex:
+    "assay": "^protein_abundance_assay\\[[0-9]+\\]" # The protein's abundance as measured in the given assay through whatever technique was employed
+    "study_variable": "^protein_abundance_study_variable\\[[0-9]+\\]" # The protein's abundance as measured in the given study variable (condition) through whatever technique was employed
diff --git a/alphabase/pg_reader/__init__.py b/alphabase/pg_reader/__init__.py
index 621bca77..c16e3971 100644
--- a/alphabase/pg_reader/__init__.py
+++ b/alphabase/pg_reader/__init__.py
@@ -1,5 +1,19 @@
 from .alphadia_pg_reader import AlphaDiaPGReader
+from .alphapept_pg_reader import AlphaPeptPGReader
 from .diann_pg_reader import DiannPGReader
+from .fragpipe_pg_reader import FragPipePGReader
+from .maxquant_pg_reader import MaxQuantPGReader
+from .mztab_pg_reader import MZTabPGReader
 from .pg_reader import pg_reader_provider
+from .spectronaut_reader import SpectronautPGReader
 
-__all__ = ["pg_reader_provider", "AlphaDiaPGReader", "DiannPGReader"]
+__all__ = [
+    "pg_reader_provider",
+    "AlphaDiaPGReader",
+    "DiannPGReader",
+    "AlphaPeptPGReader",
+    "MaxQuantPGReader",
+    "SpectronautPGReader",
+    "FragPipePGReader",
+    "MZTabPGReader",
+]
diff --git a/alphabase/pg_reader/alphapept_pg_reader.py b/alphabase/pg_reader/alphapept_pg_reader.py
new file mode 100644
index 00000000..c915e1e7
--- /dev/null
+++ b/alphabase/pg_reader/alphapept_pg_reader.py
@@ -0,0 +1,289 @@
+"""AlphaPept protein group reader."""
+
+import re
+import warnings
+from typing import Any, Literal, Optional, Union
+
+import pandas as pd
+
+from .keys import PGCols
+from .pg_reader import PGReaderBase, pg_reader_provider
+
+
+class AlphaPeptPGReader(PGReaderBase):
+    """Reader for protein group matrices from the alphapept search engine.
+
+    Per default, the reader will read raw intensities from the protein group matrix. By passing a
+    suitable regular expression, it is also possible to extract LFQ corrected intensities from the
+    reader.
+
+    Notes:
+    -----
+    AlphaPept protein group matrices contain both raw intensities and LFQ-corrected intensities.
+    The LFQ-corrected intensities are marked by an `_LFQ` suffix.
+
+    Example:
+    -------
+    Get example data
+
+    .. code-block:: python
+
+        import os
+        import tempfile
+        from alphabase.tools.data_downloader import DataShareDownloader
+        from alphabase.pg_reader import AlphaPeptPGReader
+
+
+        # Download to temporary directory
+        URL = "https://datashare.biochem.mpg.de/s/6G6KHJqwcRPQiOO"
+        download_dir = tempfile.mkdtemp()
+
+        download_path = DataShareDownloader(url=URL, output_dir=download_dir).download()
+
+
+    Per default, the reader will return the raw intensities. Additional protein features are stored
+    in the dataframe index, samples are stored as columns.
+
+    .. code-block:: python
+
+        # Get raw intensities
+        reader = AlphaPeptPGReader()
+        results = reader.import_file(download_path)
+        results.index.names
+        > FrozenList(['proteins', 'uniprot_ids', 'ensembl_ids', 'source_db', 'is_decoy'])
+        results.columns
+        > Index(['A', 'B'], dtype='object')
+
+    To read the LFQ values, pass the pre-configured key `lfq` to the reader, which represents a regular expression
+    that automatically extracts the `LFQ` columns from the protein group table.
+
+    .. code-block:: python
+
+        # Get raw intensities
+        reader = AlphaPeptPGReader(measurement_regex="lfq")
+        results = reader.import_file(download_path)
+        results.index.names
+        > FrozenList(['proteins', 'uniprot_ids', 'ensembl_ids', 'source_db', 'is_decoy'])
+        results.columns
+        > Index(['A_LFQ', 'B_LFQ'], dtype='object')
+
+
+    To check out all preconfigured regular expressions, use the `get_preconfigured_regex` method:
+
+    .. code-block:: python
+
+        AlphaPeptPGReader.get_preconfigured_regex()
+        > {'raw': '^.*(?<!_LFQ)$', 'lfq': '_LFQ$'}
+
+    """
+
+    _reader_type: str = "alphapept"
+
+    # Report file settings (delimiter + index column)
+    _FILE_DELIMITER: str = ","
+    # alphapept does not set a name for the feature column, i.e. it is set to the pandas default
+    _INDEX_COL: str = "Unnamed: 0"
+
+    # Default delimiter in fasta file headers
+    _ENTRY_DELIMITER: str = "|"
+
+    # Feature settings
+    # Decoys are prefixed with REV__ in alphapept
+    _DECOY_REGEX: str = "^REV__"
+    # Ensembl IDs are identified with a ENSEMBL prefix
+    _ENSEMBL_REGEX: str = "^ENSEMBL:"
+    _ENSEMBL_NAME: str = "ENSEMBL"
+
+    # The expected length of fasta headers is 3 (sp|Uniprot ID|Uniprot Name)
+    _FASTA_HEADER_DEFAULT_LENGTH: int = 3
+    _NA_STR: str = "na"
+    _PG_DELIMITER: str = ";"
+
+    def __init__(
+        self,
+        *,
+        column_mapping: Optional[dict[str, Any]] = None,
+        measurement_regex: Union[str, Literal["raw", "lfq"], None] = "raw",  # noqa: PYI051 raw and lfq are special cases and not equivalent to string
+    ):
+        """Initialize AlphaPept protein group matrix reader.
+
+        Parameters
+        ----------
+        column_mapping
+            Dictionary mapping alphabase column names (keys) to AlphaPept column names (values).
+            If `None`, uses default mapping from configuration file.
+        measurement_regex
+            Pattern to select quantity columns
+
+                - "raw" (default): Raw intensities (excludes _LFQ columns)
+                - "lfq": LFQ-corrected intensities (_LFQ suffix)
+                - str: Custom regular expression pattern
+                - None: All quantity columns
+
+            See class documentation for usage examples and `get_preconfigured_regex()` for available patterns.
+
+        """
+        super().__init__(
+            column_mapping=column_mapping, measurement_regex=measurement_regex
+        )
+
+    def _pre_process(self, df: pd.DataFrame) -> pd.DataFrame:
+        """Preprocess of alphapept protein group report and return modified copy of the dataframe.
+
+        Processes feature index to a parsed, streamlined version.
+
+        Parameters
+        ----------
+        df
+            alphapept protein group report.
+
+        Returns
+        -------
+        :class:`pd.DataFrame`
+            Modified copy of protein group report with parsed index. The index contains the levels
+                - proteins: str
+                - uniprot_ids: str
+                - ensembl_ids: str
+                - source_db: str
+                - is_decoy: bool
+
+        """
+        df = df.copy()
+
+        # alphapept does not set a name for the feature column
+        # load it as regular column and set it to index afterwards
+        df = df.set_index(self._INDEX_COL)
+
+        # Parse index
+        parsed_index: list[dict[str, str]] = list(
+            df.index.map(lambda idx: self._parse_alphapept_index(idx))
+        )
+
+        # Overwrite index with streamlined version
+        df.index = pd.MultiIndex.from_frame(pd.DataFrame(parsed_index))
+
+        return df
+
+    def _parse_alphapept_index(self, identifier: str) -> dict[str, str]:
+        """Parse protein identifier from AlphaPept protein group table.
+
+        Parameters
+        ----------
+        identifier : str
+            Protein identifier string from AlphaPept
+
+        Returns
+        -------
+        dict
+            Dictionary with parsed components:
+            - proteins: str, semicolon-separated protein names or self._NA_STR
+            - uniprot_ids: str, semicolon-separated UniProt IDs or self._NA_STR
+            - ensembl_ids: str, semicolon-separated ENSEMBL IDs or self._NA_STR
+            - source_db: str, semicolon-separated data sources or self._NA_STR
+            - is_decoy: bool, True if any identifier in a protein group starts with "REV__"
+
+        Examples
+        --------
+
+        .. code-block:: python
+
+            # sp|Q9NQT4|EXOS5_HUMAN
+            {"source_db": "sp", "uniprot_ids": "Q9NQT4", "ensembl_ids": "na", "proteins": "EXOS5_HUMAN", "is_decoy": False}
+
+            # Q0IIK2
+            {"source_db": self._NA_STR, "uniprot_ids": "Q0IIK2", "ensembl_ids": "na", "proteins": self._NA_STR, "is_decoy": False}
+
+            # "sp|Q9H2K8|TAOK3_HUMAN,sp|Q7L7X3|TAOK1_HUMAN"
+            {"source_db": "sp;sp", "uniprot_ids": "Q9H2K8;Q7L7X3", "ensembl_ids": "na;na", "proteins": "TAOK3_HUMAN;TAOK1_HUMAN", "is_decoy": False}
+
+            # ENSEMBL:ENSBTAP00000024146
+            {"source_db": "ENSEMBL", "uniprot_ids": self._NA_STR, "ensembl_ids": "ENSBTAP00000024146", "proteins": self._NA_STR, "is_decoy": False}
+
+            # ENSEMBL:ENSBTAP00000024146,sp|P35520|CBS_HUMAN
+            {"source_db": "ENSEMBL;sp", "uniprot_ids": "P35520", "ensembl_ids": "ENSBTAP00000024146", "proteins": "CBS_HUMAN", "is_decoy": False}
+
+            # REV__sp|Q13085|ACACA_HUMAN
+            {"source_db": "REV__sp", "uniprot_ids": "Q13085", "ensembl_ids": "na", "proteins": "ACACA_HUMAN", "is_decoy": True}
+
+        """
+        decoy_pattern = re.compile(self._DECOY_REGEX)
+        ensembl_pattern = re.compile(self._ENSEMBL_REGEX)
+
+        # Multiple proteins are separted by comma
+        protein_entries = identifier.split(",")
+
+        source_db: list[str] = []
+        uniprot_ids: list[str] = []
+        ensembl_ids: list[str] = []
+        proteins: list[str] = []
+        is_decoy: list[bool] = []
+
+        for entry in protein_entries:
+            # Decoys
+            # Identify decoys and remove decoy prefix if present
+            entry_is_decoy = bool(decoy_pattern.search(entry))
+            is_decoy.append(entry_is_decoy)
+
+            # Check for ENSEMBL format (ENSEMBL:IDENTIFIER)
+            if re.search(ensembl_pattern, entry):
+                source_db.append(self._ENSEMBL_NAME)
+
+                # Remove "ENSEMBL:" prefix
+                uniprot_ids.append(self._NA_STR)
+                proteins.append(self._NA_STR)
+                ensembl_ids.append(re.sub(ensembl_pattern, "", entry))
+
+            # Check if entry contains pipe separators (UniProt format)
+            # Options:
+            # sp|Q9H2K8|TAOK3_HUMAN
+            # Q9H2K8
+
+            # TODO: How to handle REV sequences here?
+            # Currently they are only marked by the DECOY_INDICATOR flag, but should the individual identifiers be flagged as well?
+            elif self._ENTRY_DELIMITER in entry:
+                parts = entry.split(self._ENTRY_DELIMITER)
+                if len(parts) == self._FASTA_HEADER_DEFAULT_LENGTH:
+                    source_db.append(parts[0])
+                    uniprot_ids.append(parts[1])
+                    proteins.append(parts[2])
+                    ensembl_ids.append(self._NA_STR)
+                else:
+                    # Handle unexpected format
+                    warnings.warn(
+                        f"Encountered unexpected format. Set {entry} to proteins.",
+                        stacklevel=2,
+                    )
+                    source_db.append(self._NA_STR)
+                    uniprot_ids.append(self._NA_STR)
+                    proteins.append(entry)
+                    ensembl_ids.append(self._NA_STR)
+            else:
+                # No pipes or ENSEMBL prefix, assume it's just a UniProt ID
+                uniprot_ids.append(entry)
+                source_db.append(self._NA_STR)
+                proteins.append(self._NA_STR)
+                ensembl_ids.append(self._NA_STR)
+
+        # Join with semicolons or use self._NA_STR if empty
+        source_db_str = (
+            self._PG_DELIMITER.join(source_db) if source_db else self._NA_STR
+        )
+        uniprot_ids_str = (
+            self._PG_DELIMITER.join(uniprot_ids) if uniprot_ids else self._NA_STR
+        )
+        ensembl_ids_str = (
+            self._PG_DELIMITER.join(ensembl_ids) if ensembl_ids else self._NA_STR
+        )
+        proteins_str = self._PG_DELIMITER.join(proteins) if proteins else self._NA_STR
+        is_decoy = any(is_decoy)
+
+        return {
+            PGCols.PROTEINS: proteins_str,
+            PGCols.UNIPROT_IDS: uniprot_ids_str,
+            PGCols.ENSEMBL_IDS: ensembl_ids_str,
+            PGCols.SOURCE_DB: source_db_str,
+            PGCols.DECOY_INDICATOR: is_decoy,
+        }
+
+
+pg_reader_provider.register_reader("alphapept", reader_class=AlphaPeptPGReader)
diff --git a/alphabase/pg_reader/fragpipe_pg_reader.py b/alphabase/pg_reader/fragpipe_pg_reader.py
new file mode 100644
index 00000000..454a49a3
--- /dev/null
+++ b/alphabase/pg_reader/fragpipe_pg_reader.py
@@ -0,0 +1,47 @@
+"""FragPipe protein group reader."""
+
+from typing import Literal, Optional, Union
+
+from .pg_reader import PGReaderBase, pg_reader_provider
+
+
+class FragPipePGReader(PGReaderBase):
+    """Reader for `protein.tsv` reports from FragPipe.
+
+    Example:
+    -------
+    Per default, the reader will return the raw intensities from the `razor` method. Additional protein features are stored
+    in the dataframe index, samples are stored as columns.
+
+    .. code-block:: python
+
+        # Get raw intensities
+        reader = FragPipePGReader()
+        results = reader.import_file(download_path)
+
+
+    References:
+    ----------
+    - FragPipe Documentation https://fragpipe.nesvilab.org/docs/tutorial_fragpipe_outputs.html#proteintsv
+
+    """
+
+    _reader_type: str = "fragpipe"
+
+    def __init__(  # noqa: D107 inherited from base class
+        self,
+        *,
+        column_mapping: Optional[dict[str, str]] = None,
+        measurement_regex: Union[
+            Literal[
+                "raw", "razor", "unique", "total", "lfq", "lfq_unique", "lfq_total"
+            ],
+            None,
+        ] = "razor",
+    ):
+        super().__init__(
+            column_mapping=column_mapping, measurement_regex=measurement_regex
+        )
+
+
+pg_reader_provider.register_reader("fragpipe", reader_class=FragPipePGReader)
diff --git a/alphabase/pg_reader/keys.py b/alphabase/pg_reader/keys.py
index c36648a3..e05e0c02 100644
--- a/alphabase/pg_reader/keys.py
+++ b/alphabase/pg_reader/keys.py
@@ -14,6 +14,9 @@ class PGCols(metaclass=ConstantsClass):
     UNIPROT_IDS
         Uniprot IDs of all proteins in the respective protein group.
         Individual entries are separated by a semicolon in the unified output.
+    ENSEMBL_IDS
+        ENSEMBL IDs of proteins in the respective protein group.
+        Individual entries are separated by a semicolon in the unified output.
     GENES
         Gene names encoding the proteins in the respective protein group. Uses HGNC names for humans.
         Individual entries are separated by a semicolon in the unified output.
@@ -22,6 +25,12 @@ class PGCols(metaclass=ConstantsClass):
         Individual entries are separated by a semicolon in the unified output.
     DESCRIPTION
         Long text description of one or more proteins in the respective protein group.
+    SOURCE_DB
+        Source databases for a specific feature, e.g. Uniprot, Swissprot, Ensembl.
+        Individual entries are separated by a semicolon in the unified output.
+    DECOY_INDICATOR
+        Boolean that indicates that the respective feature is maked as a decoy by the respective
+        search engine.
     N_SEQUENCES
         Number of distinct sequences identified from the data
     PEPTIDE_COUNT
@@ -34,8 +43,11 @@ class PGCols(metaclass=ConstantsClass):
     # Minimal columns
     PROTEINS = "proteins"
     UNIPROT_IDS = "uniprot_ids"
+    ENSEMBL_IDS = "ensembl_ids"
     GENES = "genes"
     PROTEIN_CANDIDATES = "protein_candidates"
     DESCRIPTION = "description"
+    SOURCE_DB = "source_db"
+    DECOY_INDICATOR = "is_decoy"
     PEPTIDE_COUNT = "peptide_count"
     PROTEOTYPIC_PEPTIDE_COUNT = "proteotypic_peptide_count"
diff --git a/alphabase/pg_reader/maxquant_pg_reader.py b/alphabase/pg_reader/maxquant_pg_reader.py
new file mode 100644
index 00000000..93a7d80e
--- /dev/null
+++ b/alphabase/pg_reader/maxquant_pg_reader.py
@@ -0,0 +1,130 @@
+"""MaxQuant Protein Group Reader."""
+
+from typing import Literal, Optional, Union
+
+import pandas as pd
+
+from .keys import PGCols
+from .pg_reader import PGReaderBase, pg_reader_provider
+
+
+class MaxQuantPGReader(PGReaderBase):
+    r"""Reader for protein group matrices from the MaxQuant search engine.
+
+    By default, the reader will read raw protein intensities from the protein group matrix. By passing
+    a suitable regular expression, it is also possible to extract LFQ
+
+    Examples
+    --------
+    Get example data
+
+    .. code-block:: python
+
+        import os
+        import tempfile
+        from alphabase.tools.data_downloader import DataShareDownloader
+        from alphabase.pg_reader import MaxQuantPGReader
+
+
+        # Download to temporary directory
+        URL = "https://datashare.biochem.mpg.de/s/KvToteOu0zzH17C"
+        download_dir = tempfile.mkdtemp()
+
+        download_path = DataShareDownloader(url=URL, output_dir=download_dir).download()
+
+
+    Per default, the reader will return the raw intensities. Additional protein features are stored
+    in the dataframe index, samples are stored as columns.
+
+    .. code-block:: python
+
+        # Get raw intensities
+        reader = MaxQuantPGReader()
+        results = reader.import_file(download_path)
+        results.index.names
+        > FrozenList(['proteins', 'uniprot_ids', 'genes', 'is_decoy'])
+        results.columns
+        > Index([...], dtype='object', length=312)
+
+    You can get other intensity types by passing a specific pattern to the `measurment_regex` parameter during class initialization.
+    To checkout all preconfigured regular expressions that enable you to retrieve different intensity modalities,
+    use the `get_preconfigured_regex` method:
+
+    .. code-block:: python
+
+        MaxQuantPGReader.get_preconfigured_regex()
+        > {
+            'raw': '^Intensity(?!\\s[LHM]\\s).+$',
+            'lfq': '^LFQ intensity(?!\\s[LHM]\\s).+$',
+            'ibaq': '^iBAQ(?!\\s[LHM]\\s).+$'
+        }
+
+    You can also pass a custom regular expression, e.g. to retrieve specific channels in TMT experiments
+
+    .. code-block:: python
+
+        # Match "Intensity H+ <sample>"
+        reader = MaxQuantPGReader(measurement_regex="^Intensity H .+")
+
+
+    References
+    ----------
+    - MaxQuant Documentation (Cox Lab, 2024-06-27): https://cox-labs.github.io/coxdocs/output_tables.html#protein-groups,
+    (last viewed 2025-08)
+
+    """
+
+    _reader_type = "maxquant"
+
+    def __init__(
+        self,
+        *,
+        column_mapping: Optional[dict[str, str]] = None,
+        measurement_regex: Union[str, Literal["raw", "lfq", "ibaq"], None] = "raw",  # noqa: PYI051 raw and lfq are special cases and not equivalent to string
+    ):
+        """Initialize MaxQuant protein group matrix reader.
+
+        Parameters
+        ----------
+        column_mapping
+            Dictionary mapping alphabase column names (keys) to MaxQuant column names (values).
+            If `None`, uses default mapping from configuration file.
+        measurement_regex
+            Pattern to select quantity columns
+
+                - "raw" (default): Raw intensities
+                - "lfq": LFQ-corrected intensities
+                - "ibaq": Intensity-Based Absolute Quantification-corrected intensities
+                - custom: Any valid regular expression
+
+            See class documentation for usage examples and `get_preconfigured_regex()` for available patterns.
+
+        """
+        super().__init__(
+            column_mapping=column_mapping, measurement_regex=measurement_regex
+        )
+
+    def _post_process(self, df: pd.DataFrame) -> pd.DataFrame:
+        """Process MaxQuant protein group table after standardization.
+
+        Convert MaxQuant-specific decoy indicator (+) to standardized boolean series.
+
+        Notes
+        -----
+        MaxQuant marks peptides/proteins that were found to be part of a protein derived from the reversed part of the decoy database
+        with +. These should be removed for further data analysis.
+
+        References
+        ----------
+        https://cox-labs.github.io/coxdocs/output_tables.html#protein-groups (Status: 2025-08)
+
+        """
+        # Convert `+` indicator to boolean
+        if PGCols.DECOY_INDICATOR in df.columns:
+            df[PGCols.DECOY_INDICATOR] = df[PGCols.DECOY_INDICATOR].apply(
+                lambda x: x == "+"
+            )
+        return df
+
+
+pg_reader_provider.register_reader("maxquant", reader_class=MaxQuantPGReader)
diff --git a/alphabase/pg_reader/mztab_pg_reader.py b/alphabase/pg_reader/mztab_pg_reader.py
new file mode 100644
index 00000000..3219c25d
--- /dev/null
+++ b/alphabase/pg_reader/mztab_pg_reader.py
@@ -0,0 +1,116 @@
+"""FragPipe protein group reader."""
+
+from pathlib import Path
+from typing import Literal, Optional, Union
+
+import pandas as pd
+
+from .pg_reader import PGReaderBase, pg_reader_provider
+
+
+class MZTabPGReader(PGReaderBase):
+    """Reader for MZTab search engine output.
+
+    MZTab is a standardized tab-delimited format for reporting proteomics and metabolomics results.
+    The format organizes data into distinct sections: metadata (MTD), protein groups (PRH/PRT),
+    peptides (PEH/PEP), PSMs (PSH/PSM), and small molecules (SMH/SML), with each section identified
+    by specific three-letter prefixes. This reader extracts protein-level quantification data from
+    the PRT lines, which contain protein abundances across samples or study variables.
+
+    Example:
+    -------
+    Per default, the reader will return the raw intensities from the `razor` method. Additional protein features are stored
+    in the dataframe index, samples are stored as columns.
+
+    .. code-block:: python
+
+        from alphabase.pg_reader import MZTabPGReader
+
+        # Get raw intensities
+        reader = MZTabPGReader()
+        results = reader.import_file(path)
+
+
+    References:
+    ----------
+    - Griss, J. et al. The mzTab Data Exchange Format: Communicating Mass-spectrometry-based Proteomics and Metabolomics Experimental Results to a Wider Audience*. Molecular & Cellular Proteomics 13, 2765-2775 (2014).
+    - Official MZTab Repository: https://github.com/HUPO-PSI/mzTab.git
+    - Official documentation: https://hupo-psi.github.io/mzTab/
+
+    """
+
+    _reader_type: str = "mztab"
+
+    _PROTEIN_ROW_INDICATOR: str = "PRT"
+    _PROTEIN_HEADER_INDICATOR: str = "PRH"
+    _SEPARATOR: str = "\t"
+
+    def __init__(  # noqa: D107 inherited from base class
+        self,
+        *,
+        column_mapping: Optional[dict[str, str]] = None,
+        measurement_regex: Union[
+            str, Literal["assay", "study_variable"], None  # noqa: PYI051 raw and lfq are special cases and not equivalent to string
+        ] = "assay",
+    ):
+        super().__init__(
+            column_mapping=column_mapping, measurement_regex=measurement_regex
+        )
+
+    def _load_file(self, file_path: str) -> pd.DataFrame:
+        """Load MZTab file and extract protein data section.
+
+        Parameters
+        ----------
+        file_path : str
+            Path to MZTab file
+
+        Returns
+        -------
+        pd.DataFrame
+            DataFrame containing protein data from MZTab file
+
+        Notes
+        -----
+        Protein lines are indicated with a leading `PRT`. The protein metadata header is
+        indicated with a leading `PRH`. The file is tab separated.
+
+        Raises
+        ------
+        ValueError
+            If no protein data or metadata is found in the file
+
+        """
+        file_path = Path(file_path)
+        protein_header = None
+        protein_rows = []
+
+        with file_path.open() as f:
+            for line in f:
+                line_stripped = line.strip()
+
+                if line_stripped.startswith(self._PROTEIN_HEADER_INDICATOR):
+                    # Protein header line - remove 'PRH' prefix and parse columns
+                    header_content = line_stripped[3:].strip()
+                    protein_header = header_content.split(self._SEPARATOR)
+
+                elif line_stripped.startswith(self._PROTEIN_ROW_INDICATOR):
+                    # Protein data line - remove 'PRT' prefix and parse data
+                    row_content = line_stripped[3:].strip()
+                    protein_rows.append(row_content.split(self._SEPARATOR))
+
+        # Validate that we found protein data
+        if protein_header is None:
+            raise ValueError(
+                f"No protein header ({self._PROTEIN_HEADER_INDICATOR}) found in MZTab file"
+            )
+
+        if not protein_rows:
+            raise ValueError(
+                f"No protein data rows ({self._PROTEIN_ROW_INDICATOR}) found in MZTab file"
+            )
+
+        return pd.DataFrame(protein_rows, columns=protein_header)
+
+
+pg_reader_provider.register_reader("mztab", reader_class=MZTabPGReader)
diff --git a/alphabase/pg_reader/pg_reader.py b/alphabase/pg_reader/pg_reader.py
index 9da75cb4..a09eb1f5 100644
--- a/alphabase/pg_reader/pg_reader.py
+++ b/alphabase/pg_reader/pg_reader.py
@@ -4,7 +4,7 @@
 import warnings
 from copy import deepcopy
 from pathlib import Path
-from typing import Any, Dict, Iterable, Optional, Type
+from typing import Any, Dict, Iterable, Optional, Type, Union
 
 import pandas as pd
 
@@ -91,11 +91,7 @@ def __init__(
             else pg_reader_yaml[self._reader_type][_COLUMN_MAPPING]
         )
 
-        self.measurement_regex = (
-            measurement_regex
-            if measurement_regex is not None
-            else pg_reader_yaml[self._reader_type][_MEASUREMENT_REGEX]
-        )
+        self.measurement_regex = self._get_measurement_regex(regex=measurement_regex)
 
     def add_column_mapping(self, column_mapping: Dict) -> None:
         """Add additional column mappings for the search engine."""
@@ -146,7 +142,10 @@ def import_file(self, file_path: str) -> pd.DataFrame:
                 extra_columns=feature_columns,
             )
 
-        return df.set_index(feature_columns)
+        df = self._post_process(df)
+
+        # Keep dataframe index as default if no features are specified in column mapping
+        return df.set_index(feature_columns) if len(feature_columns) > 0 else df
 
     def _load_file(self, file_path: str) -> pd.DataFrame:
         """Load protein group (PG) file into a dataframe.
@@ -169,18 +168,20 @@ def _load_file(self, file_path: str) -> pd.DataFrame:
         """
         if Path(file_path).suffix == ".hdf":
             return pd.read_hdf(file_path)
+        if Path(file_path).suffix == ".parquet":
+            return pd.read_parquet(file_path)
 
         sep = _get_delimiter(file_path)
         return pd.read_csv(file_path, sep=sep, keep_default_na=False)
 
     def _pre_process(self, df: pd.DataFrame) -> pd.DataFrame:
-        """Preprocess dataframe before standardizing columns and return an updated copy."""
+        """Preprocess dataframe before standardizing columns."""
         return df
 
     def _translate_columns(
         self, df: pd.DataFrame, column_mapping: dict[str, str]
     ) -> pd.DataFrame:
-        """Translate standardized columns in dataframe from other search engines to AlphaBase format and return an updated copy."""
+        """Translate standardized columns in dataframe from other search engines to AlphaBase format."""
         return df.rename(columns=column_mapping)
 
     def _filter_measurement(
@@ -189,7 +190,7 @@ def _filter_measurement(
         regex: str,
         extra_columns: Optional[Iterable[str]] = None,
     ) -> pd.DataFrame:
-        """Subset :class:`pd.DataFrame` to columns matching a regex plus optionally extra columns and return an updated copy.
+        """Subset :class:`pd.DataFrame` to columns matching a regex plus optionally extra columns.
 
         Parameters
         ----------
@@ -217,6 +218,54 @@ def _filter_measurement(
 
         return df[regex_columns + extra_columns]
 
+    def _post_process(self, df: pd.DataFrame) -> pd.DataFrame:
+        """Process dataframe after standardizing columns."""
+        return df
+
+    def _get_measurement_regex(self, regex: Optional[str]) -> Union[str, None]:
+        """Get the correct named measurement regex from the reader configuration.
+
+        The function tries to match the provided `regex` to the keys in `measurement_regex` in the reader configuration. This
+        enables users to provide tangible names for the columns they want instead of abstract regular expressions.
+        If a match is found, it returns the associated value (the actual regex).
+        If this not possible, the function assumes that a regular expression was passed and
+        simply returns `regex` (special case: if `_MEASUREMENT_REGEX` does not contain any values, it also returns the `regex`)
+
+
+        Parameters
+        ----------
+        regex
+            None, Name of regular expression in reader configuration or a regular expression.
+
+
+        Returns
+        -------
+        str | None
+            Output depends on regex and the the key `measurement_regex` in reader configuration
+
+            - If `regex` is a key in the reader configuration `measurement_regex`, returns
+            the associated value
+            - If `regex` is not in the reader configuration, assumes that `regex` is an
+            actual regular expression and returns it as is (special case: if `regex` is `None`, returns `None`)
+            - If `measurement_regex` is not configured (`None`), returns `regex`.
+
+        """
+        reader_config = pg_reader_yaml[self._reader_type]
+        measurement_regex_config = reader_config.get(_MEASUREMENT_REGEX)
+
+        if measurement_regex_config is None:
+            return regex
+
+        config_regex = measurement_regex_config.get(regex)
+
+        return config_regex if config_regex is not None else regex
+
+    @classmethod
+    def get_preconfigured_regex(cls) -> dict[str, str]:
+        """Get all predefined regular expressions for this reader class as configured in `alphabase.constants.pg_reader_yaml`."""
+        available_regex = pg_reader_yaml[cls._reader_type][_MEASUREMENT_REGEX]
+        return available_regex if isinstance(available_regex, dict) else {}
+
 
 # TODO: Refactor and create base class for PG Reader provider and PSMReaderProvider
 class PGReaderProvider:
diff --git a/alphabase/pg_reader/spectronaut_reader.py b/alphabase/pg_reader/spectronaut_reader.py
new file mode 100644
index 00000000..bdee9088
--- /dev/null
+++ b/alphabase/pg_reader/spectronaut_reader.py
@@ -0,0 +1,108 @@
+"""Spectronaut Protein Group Reader."""
+
+import re
+from typing import Any, Literal, Optional, Union
+
+import numpy as np
+import pandas as pd
+
+from .pg_reader import PGReaderBase, pg_reader_provider
+
+
+class SpectronautPGReader(PGReaderBase):
+    """Reader for pivot reports from the Spectronaut search engine.
+
+    Examples
+    --------
+    Get example data
+
+    .. code-block:: python
+
+        import os
+        import tempfile
+        from alphabase.tools.data_downloader import DataShareDownloader
+        from alphabase.pg_reader import SpectronautPGReader
+
+
+        # Download to temporary directory
+        # Data provided by Pham et al, 2024 (https://doi.org/10.1093/bioinformatics/btae432),
+        # originally generated by Bekker-Jensen et al, 2020 (https://doi.org/10.1038/s41467-020-14609-1)
+        URL = "https://datashare.biochem.mpg.de/s/ot008eF6wwSISvk"
+        download_dir = tempfile.mkdtemp()
+
+        download_path = DataShareDownloader(url=URL, output_dir=download_dir).download()
+
+
+    The reader will return the values that are stored in the spectronaut report. Note that the nature of
+    these values depends on the selection made by the user during the data export in Spectronaut and might
+    represent Protein Quantities or Peptide Quantities.
+
+    .. code-block:: python
+
+        reader = SpectronautPGReader()
+        results = reader.import_file(download_path)
+        results.index.names
+        > FrozenList(['proteins', 'genes'])
+
+    Spectronaut allows users to export a multitude of feature-level metadata. You can retrieve additional
+    columns from the report by using the `add_column_mapping` method
+
+    .. code-block:: python
+
+        reader = SpectronautPGReader()
+        reader.add_column_mapping({"organism": "PG.Organisms"})
+        results = reader.import_file(spectronaut_path)
+        results.index.names
+        > FrozenList(['proteins', 'genes', 'organism'])
+
+    """
+
+    _reader_type: str = "spectronaut"
+
+    _to_nan_values: tuple[Any] = ("Filtered",)
+
+    def __init__(
+        self,
+        *,
+        column_mapping: Optional[dict[str, str]] = None,
+        measurement_regex: Union[str, Literal["default"], None] = "default",  # noqa: PYI051 default are special cases and not equivalent to string
+    ):
+        """Initialize Spectronaut protein group matrix reader.
+
+        Parameters
+        ----------
+        column_mapping
+            Dictionary mapping alphabase column names (keys) to Spectronaut column names (values).
+            If `None`, uses default mapping from configuration file.
+        measurement_regex
+            Pattern to select quantity columns
+
+                - "default" (default): Intensities exported by the user in the spectronaut report. Might depend on the specific report.
+                - custom: Any valid regular expression
+
+            See class documentation for usage examples and `get_preconfigured_regex()` for available patterns.
+
+        """
+        super().__init__(
+            column_mapping=column_mapping, measurement_regex=measurement_regex
+        )
+
+    def _post_process(self, df: pd.DataFrame) -> pd.DataFrame:
+        """Process Spectronaut protein group table after standardization.
+
+        Notes
+        -----
+        Spectronaut reports might contain "Filtered" as values. Replace these values with NAN
+        and assure that floating point values are returned
+
+        """
+        # Only modify the intensity columns, as defined by the `measurement_regex`
+        pattern = re.compile(self.measurement_regex)
+        regex_columns = [col for col in df.columns if re.search(pattern, col)]
+        df[regex_columns] = df[regex_columns].replace(self._to_nan_values, np.nan)
+        df[regex_columns] = df[regex_columns].astype(float)
+
+        return df
+
+
+pg_reader_provider.register_reader("spectronaut", reader_class=SpectronautPGReader)
diff --git a/docs/api.rst b/docs/api.rst
index 7a4c8218..72a33557 100644
--- a/docs/api.rst
+++ b/docs/api.rst
@@ -36,6 +36,7 @@ Reader
    :maxdepth: 2
 
    modules_psm_reader
+   modules_pg_reader
 
 
 I/O
diff --git a/docs/modules_pg_reader.rst b/docs/modules_pg_reader.rst
new file mode 100644
index 00000000..cc27886d
--- /dev/null
+++ b/docs/modules_pg_reader.rst
@@ -0,0 +1,17 @@
+alphabase.pg_reader
+===========================
+
+All pg_readers can be accessed by
+:obj:`pg_reader_provider <alphabase.pg_reader.pg_reader.pg_reader_provider>`.
+
+.. toctree::
+   :maxdepth: 1
+
+   pg_reader/pg_base
+   pg_reader/alphadia_pg_reader
+   pg_reader/alphapept_pg_reader
+   pg_reader/diann_pg_reader
+   pg_reader/fragpipe_pg_reader
+   pg_reader/maxquant_pg_reader
+   pg_reader/mztab_pg_reader
+   pg_reader/spectronaut_pg_reader
diff --git a/docs/pg_reader/alphadia_pg_reader.rst b/docs/pg_reader/alphadia_pg_reader.rst
new file mode 100644
index 00000000..c4c79426
--- /dev/null
+++ b/docs/pg_reader/alphadia_pg_reader.rst
@@ -0,0 +1,7 @@
+alphabase.pg_reader.alphadia_pg_reader
+======================================
+
+.. automodule:: alphabase.pg_reader.alphadia_pg_reader
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/pg_reader/alphapept_pg_reader.rst b/docs/pg_reader/alphapept_pg_reader.rst
new file mode 100644
index 00000000..e1d08593
--- /dev/null
+++ b/docs/pg_reader/alphapept_pg_reader.rst
@@ -0,0 +1,7 @@
+alphabase.pg_reader.alphapept_pg_reader
+=======================================
+
+.. automodule:: alphabase.pg_reader.alphapept_pg_reader
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/pg_reader/diann_pg_reader.rst b/docs/pg_reader/diann_pg_reader.rst
new file mode 100644
index 00000000..15a7d0e8
--- /dev/null
+++ b/docs/pg_reader/diann_pg_reader.rst
@@ -0,0 +1,7 @@
+alphabase.pg_reader.diann_pg_reader
+===================================
+
+.. automodule:: alphabase.pg_reader.diann_pg_reader
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/pg_reader/fragpipe_pg_reader.rst b/docs/pg_reader/fragpipe_pg_reader.rst
new file mode 100644
index 00000000..fff83518
--- /dev/null
+++ b/docs/pg_reader/fragpipe_pg_reader.rst
@@ -0,0 +1,7 @@
+alphabase.pg_reader.fragpipe_pg_reader
+======================================
+
+.. automodule:: alphabase.pg_reader.fragpipe_pg_reader
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/pg_reader/maxquant_pg_reader.rst b/docs/pg_reader/maxquant_pg_reader.rst
new file mode 100644
index 00000000..5744f171
--- /dev/null
+++ b/docs/pg_reader/maxquant_pg_reader.rst
@@ -0,0 +1,7 @@
+alphabase.pg_reader.maxquant_pg_reader
+======================================
+
+.. automodule:: alphabase.pg_reader.maxquant_pg_reader
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/pg_reader/mztab_pg_reader.rst b/docs/pg_reader/mztab_pg_reader.rst
new file mode 100644
index 00000000..69475764
--- /dev/null
+++ b/docs/pg_reader/mztab_pg_reader.rst
@@ -0,0 +1,7 @@
+alphabase.pg_reader.mztab_pg_reader
+======================================
+
+.. automodule:: alphabase.pg_reader.mztab_pg_reader
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/pg_reader/pg_base.rst b/docs/pg_reader/pg_base.rst
new file mode 100644
index 00000000..a18e1710
--- /dev/null
+++ b/docs/pg_reader/pg_base.rst
@@ -0,0 +1,7 @@
+alphabase.pg_reader.base
+========================
+
+.. automodule:: alphabase.pg_reader.pg_reader
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/pg_reader/spectronaut_pg_reader.rst b/docs/pg_reader/spectronaut_pg_reader.rst
new file mode 100644
index 00000000..5bc39fca
--- /dev/null
+++ b/docs/pg_reader/spectronaut_pg_reader.rst
@@ -0,0 +1,7 @@
+alphabase.pg_reader.spectronaut_reader
+======================================
+
+.. automodule:: alphabase.pg_reader.spectronaut_reader
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/requirements/requirements.txt b/requirements/requirements.txt
index f27dba2a..204f0829 100644
--- a/requirements/requirements.txt
+++ b/requirements/requirements.txt
@@ -17,3 +17,4 @@ pyteomics==4.7.5
 pyyaml==6.0.2
 lxml==5.3.0  # required by pyteomics
 rdkit==2024.3.3
+tables==3.9.2 # required to read HDF files, latest version compatible with 3.9
diff --git a/requirements/requirements_loose.txt b/requirements/requirements_loose.txt
index 9c9f3764..17f6e4e1 100644
--- a/requirements/requirements_loose.txt
+++ b/requirements/requirements_loose.txt
@@ -15,3 +15,4 @@ pyteomics
 pyyaml
 lxml
 rdkit
+tables
diff --git a/tests/integration/conftest.py b/tests/integration/conftest.py
index d63e5b92..ce29948e 100644
--- a/tests/integration/conftest.py
+++ b/tests/integration/conftest.py
@@ -1,5 +1,6 @@
 """Shared logic for integration tests."""
 
+import os
 from pathlib import Path
 
 import pandas as pd
@@ -8,33 +9,241 @@
 from alphabase.tools.data_downloader import DataShareDownloader
 
 
-@pytest.fixture(scope="function")
-def example_alphadia_tsv(tmp_path) -> tuple[Path, pd.DataFrame]:
-    """Get and parse real alphadia PG report matrix."""
-    URL = "https://datashare.biochem.mpg.de/s/cN1tmElfgKOe1cW"
-    REF_URL = "https://datashare.biochem.mpg.de/s/vtgitlrJNeaWl9U"
+def get_remote_data_with_ref(
+    url: str, ref_url: str, directory: Path
+) -> tuple[str, pd.DataFrame]:
+    """Utility function to get test and reference data for utility tests from MPIB datashare.
+
+    Parameters
+    ----------
+    url
+        URL to test data on MPIB datashare
+    ref_url
+        Reference URL pointing to a tabular parquet file.
+    directory
+        Directory to which the data is written
 
-    download_path = DataShareDownloader(url=URL, output_dir=tmp_path).download()
-    reference_download_path = DataShareDownloader(
-        url=REF_URL, output_dir=tmp_path
-    ).download()
+    Returns
+    -------
+    tuple[str, pd.DataFrame]
+        - `str`: Path to test data
+        - :class:`pd.DataFrame` Reference data
+    """
+    try:
+        download_path = DataShareDownloader(url=url, output_dir=directory).download()
+        reference_download_path = DataShareDownloader(
+            url=ref_url, output_dir=directory
+        ).download()
+    except ValueError as e:
+        pytest.skip(f"Skipping test: File download failed -> {url}. Error: {e}")
 
     reference = pd.read_parquet(reference_download_path)
 
     return download_path, reference
 
 
+def write_test_data(data: str, directory: Path, test_case_name: str) -> Path:
+    """Write string test data to a temporary directory"""
+    outpath = directory / test_case_name
+    with open(outpath, "w") as f:
+        f.write(data)
+
+    return outpath
+
+
+def get_local_reference_data(test_case_name: str) -> pd.DataFrame:
+    """Get locally stored tabular reference data in parquet format."""
+    current_file_directory = os.path.dirname(os.path.abspath(__file__))
+    test_data_path = Path(f"{current_file_directory}/reference_data")
+
+    out_file_path = test_data_path / f"reference_{test_case_name}.parquet"
+
+    return pd.read_parquet(out_file_path)
+
+
+@pytest.fixture(scope="function")
+def example_alphadia_tsv(tmp_path) -> tuple[Path, pd.DataFrame]:
+    """Get and parse real alphadia PG report matrix."""
+    TEST_FILE_NAME = "pg_alphadia_1.10.0.tsv"
+    TEST_DATA = """pg	20231024_OA3_TiHe_ADIAMA_HeLa_200ng_Evo01_21min_F-40_iO_before_03	20231024_OA3_TiHe_ADIAMA_HeLa_200ng_Evo01_21min_F-40_iO_before_02	20231024_OA3_TiHe_ADIAMA_HeLa_200ng_Evo01_21min_F-40_iO_before_01	20231023_OA3_TiHe_ADIAMA_HeLa_200ng_Evo01_21min_F-40_iO_after_03	20231023_OA3_TiHe_ADIAMA_HeLa_200ng_Evo01_21min_F-40_iO_after_02	20231023_OA3_TiHe_ADIAMA_HeLa_200ng_Evo01_21min_F-40_iO_after_01
+A0A024RBG1	559781.647066	628511.172820	0.000000	315386.653819	275370.178204	450564.848090
+A0A024RBG1;Q9NZJ9	1331060.596908	1400359.709096	1551987.247261	1606094.840224	1464152.240357	1397025.649441
+A0A075B759;A0A075B767;P62937	202474156.671492	8552201.747724	183742451.459914	167487371.653595	176824534.826281	159521964.429115
+A0A096LP01	635509.232263	458940.966428	418449.518337	403293.184021	231746.709822	273136.259407
+A0A096LP49	177706.917984	138753.695624	251360.059998	129669.865462	127609.498228	162319.996826
+A0A0B4J2D5	5386483.571835	4927230.663970	3806946.300786	4485152.050409	3664786.826994	3945199.622557
+A0A0B4J2F0	3033922.895882	5038459.128706	3106762.145556	3048106.999244	3172164.950897	2780685.447282
+A0A0B4J2F2	571248.250425	618685.126286	565349.589227	581144.208866	556942.066577	522933.955632
+A0A0B4J2F2;Q9H0K1	0.000000	41148.449649	36376.780640	22298.873220	71988.893281	53487.956335
+    """
+
+    file_path = write_test_data(
+        data=TEST_DATA, directory=tmp_path, test_case_name=TEST_FILE_NAME
+    )
+    reference = get_local_reference_data(test_case_name=TEST_FILE_NAME)
+
+    return file_path, reference
+
+
 @pytest.fixture(scope="function")
 def example_diann_tsv(tmp_path) -> tuple[Path, pd.DataFrame]:
     """Get and parse real DIANN PG report matrix."""
-    URL = "https://datashare.biochem.mpg.de/s/R7GYhwArBO2NS9J"
-    REF_URL = "https://datashare.biochem.mpg.de/s/g5rsaGeGkbyKNam"  # Ground truth
+    TEST_FILE_NAME = "pg_diann_1.8.1.tsv"
+    TEST_DATA = """Protein.Group	Protein.Ids	Protein.Names	Genes	First.Protein.Description	S1	S2	S3	S4	S5	S6	S7	S8	S9	S10	S11	S12	S13	S14	S15	S16	S17	S18	S19	S20
+A0A024R4E5;C9J5E5;C9JBS3;C9JEJ8;C9JES8;C9JHN6;C9JHS7;C9JHZ8;C9JIZ1;C9JK79;C9JT62;C9JZI8	C9J5E5;C9JT62;C9JIZ1;C9JEJ8;A0A024R4E5;C9JHZ8;C9JHN6;C9JK79;C9JBS3;C9JES8;C9JZI8;C9JHS7	A0A024R4E5_HUMAN;C9J5E5_HUMAN;C9JBS3_HUMAN;C9JEJ8_HUMAN;C9JES8_HUMAN;C9JHN6_HUMAN;C9JHS7_HUMAN;C9JHZ8_HUMAN;C9JIZ1_HUMAN;C9JK79_HUMAN;C9JT62_HUMAN;C9JZI8_HUMAN	HDLBP	High density lipoprotein binding protein (Vigilin), isoform CRA_a	380503.0		609383.0		155999.0		169429.0	196505.0	595183.0	111595.0	334461.0	82923.7		236770.0	662304.0	832051.0			794752.0
+A0A024R6I7;A0A0G2JRN3	A0A0G2JRN3;A0A024R6I7	A0A024R6I7_HUMAN;A0A0G2JRN3_HUMAN	SERPINA1	Alpha-1-antitrypsin			4524910.0	7953070.0			6236010.0
+A0A024RBG1	A0A024RBG1	NUD4B_HUMAN	NUDT4B	Diphosphoinositol polyphosphate phosphohydrolase NUDT4B
+A0A024RBG1;O95989;Q9NZJ9	Q8NFP7;O95989;Q9NZJ9;A0A024RBG1;Q96G61	NUD4B_HUMAN;NUDT3_HUMAN;NUDT4_HUMAN	NUDT3;NUDT4;NUDT4B	Diphosphoinositol polyphosphate phosphohydrolase NUDT4B		838585.0	919948.0		1625540.0	1225840.0	1211040.0	1207340.0	927238.0			652755.0			1338730.0			1223320.0	1159750.0
+A0A024RBG1;Q9NZJ9	Q8NFP7;Q9NZJ9;A0A024RBG1;Q96G61;F8VRL4;A0A0C4DGJ4;F8VRR0	NUD4B_HUMAN;NUDT4_HUMAN	NUDT4;NUDT4B	Diphosphoinositol polyphosphate phosphohydrolase NUDT4B			1346170.0					710272.0							1452580.0	1424220.0		907826.0	656785.0
+A0A075B6H7	P01624;A0A0C4DH55;A0A075B6H7;A0A0C4DH90	KV37_HUMAN	IGKV3-7	Probable non-functional immunoglobulin kappa variable 3-7	2027400.0	23666500.0	1558870.0	7370810.0	9915510.0	8676680.0	3295180.0	7983430.0	5803570.0	3372760.0	2060940.0	5969560.0	2114020.0	12996600.0	1796950.0	5447590.0	11121100.0	9062460.0	3033990.0	8042930.0
+A0A075B6H9	A0A075B6H9	LV469_HUMAN	IGLV4-69	Immunoglobulin lambda variable 4-69
+A0A075B6I0	A0A075B6I0	LV861_HUMAN	IGLV8-61	Immunoglobulin lambda variable 8-61																		1089670.0
+A0A075B6I9	A0A075B6I9	LV746_HUMAN	IGLV7-46	Immunoglobulin lambda variable 7-46																		160851.0
+A0A075B6J9	A0A075B6J9	LV218_HUMAN	IGLV2-18	Immunoglobulin lambda variable 2-18
+"""
+    file_path = write_test_data(
+        data=TEST_DATA, directory=tmp_path, test_case_name=TEST_FILE_NAME
+    )
+    reference = get_local_reference_data(test_case_name=TEST_FILE_NAME)
 
-    download_path = DataShareDownloader(url=URL, output_dir=tmp_path).download()
-    reference_download_path = DataShareDownloader(
-        url=REF_URL, output_dir=tmp_path
-    ).download()
+    return file_path, reference
 
-    reference = pd.read_parquet(reference_download_path)
 
-    return (download_path, reference)
+@pytest.fixture(scope="function")
+def example_alphapept_csv(tmp_path) -> tuple[Path, pd.DataFrame]:
+    """Get and parse real alphapept protein group report matrix."""
+    TEST_FILE_NAME = "pg_alphapept_0.5.3.tsv"
+    TEST_DATA = """,A_LFQ,B_LFQ,A,B
+sp|P36578|RL4_HUMAN,466932936.27537036,484408315.44570005,445273477.0318756,506067774.6891948
+sp|Q9P258|RCC2_HUMAN,407484183.9302226,413813180.5879775,417785611.6324583,403511752.8857417
+sp|O60518|RNBP6_HUMAN,4960386.374516514,2022553.3655254466,1295621.2466679448,5687318.493374016
+sp|P55036|PSMD4_HUMAN,115742020.94987468,112357130.22767611,113087994.44403341,115011156.7335174
+sp|A1X283|SPD2B_HUMAN,12471120.728621317,11805815.433172602,13801771.733223092,10475164.42857083
+sp|Q9NQP4|PFD4_HUMAN,57679656.60293927,55263433.12026603,51658759.48341585,61284330.23978944
+sp|Q01780|EXOSX_HUMAN,32021500.62272774,35741978.29113341,30358054.51756826,37405424.3962929
+sp|Q9Y490|TLN1_HUMAN,2537151410.5524015,2609648642.159936,2544948561.884034,2601851490.8283033
+sp|P35221|CTNA1_HUMAN,225968334.02204236,234103031.64081344,221399683.34428945,238671682.3185664
+    """
+    file_path = write_test_data(
+        data=TEST_DATA, directory=tmp_path, test_case_name=TEST_FILE_NAME
+    )
+    reference = get_local_reference_data(test_case_name=TEST_FILE_NAME)
+
+    return file_path, reference
+
+
+@pytest.fixture(scope="function")
+def example_alphapept_hdf(tmp_path) -> tuple[Path, pd.DataFrame]:
+    """Get and parse real alphapept protein group report matrix."""
+    URL = "https://datashare.biochem.mpg.de/s/ZKwmZGssk9dHtic"
+    REF_URL = "https://datashare.biochem.mpg.de/s/gVhEy0mjrEE9F5f"
+
+    return get_remote_data_with_ref(url=URL, ref_url=REF_URL, directory=tmp_path)
+
+
+@pytest.fixture(scope="function")
+def example_maxquant_tsv(tmp_path) -> tuple[Path, pd.DataFrame]:
+    """Get and parse real alphapept protein group report matrix."""
+    TEST_FILE_NAME = "pg_maxquant.2024.tsv"
+    TEST_DATA = """Protein IDs	Majority protein IDs	Peptide counts (all)	Peptide counts (razor+unique)	Peptide counts (unique)	Protein names	Gene names	Fasta headers	Number of proteins	Peptides	Razor + unique peptides	Unique peptides	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc1 (2)	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc10	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc11	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc14	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc15	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc16	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc17	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc18	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc19	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc2 (2)	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc20	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc21	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc22	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc23	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc24	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc3 (2)	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc4 (2)	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc5 (2)	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc6	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc8	Peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc9	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac1	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac10	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac11	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac12	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac13	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac14	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac15	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac16	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac17	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac18	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac19	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac2	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac20	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac21	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac22	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac23	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac24	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac3	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac4	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac5	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac6	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac7	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac8	Peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac9	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc1	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc10	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc11	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc12	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc13	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc14	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc15	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc16	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc17	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc18	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc19	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc2	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc20	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc21	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc22	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc23	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc24	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc3	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc4	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc5	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc6	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc7	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc8	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc9	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc12	Peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc13	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc1	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc10	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc11	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc12	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc13	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc14	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc15	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc16	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc17	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc18	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc19	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc2	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc20	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc21	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc22	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc23	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc24	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc3	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc4	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc5	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc6	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc7	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc8	Peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc9	Peptides 20161017_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc7	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F1	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F10_170503153643	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F11	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F12	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F13	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F14	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F15	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F16	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F17	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F18	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F19	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F2	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F20	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F21	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F22	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F23	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F24	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F3	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F4	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F5	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F6	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F7	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F8	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F9	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F1_170427224508	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F10	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F11	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F12	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F13	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F14	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F15	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F16	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F17	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F18	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F19	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F2_170427235251	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F20	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F21	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F22	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F23	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F24	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F3_170428010030	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F4_170428020817	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F5	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F6	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F7	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F8	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F9	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F1	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F10	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F11	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F12	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F13	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F14	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F15	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F16	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F17	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F18	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F19	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F2	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F20	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F21	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F22	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F23	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F24	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F3	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F4	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F5	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F6	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F7	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F8	Peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F9	Peptides Liver_Rep1_31_C6	Peptides Liver_Rep1_32_C7	Peptides Liver_Rep1_33_C8	Peptides Liver_Rep1_34_C9	Peptides Liver_Rep1_35_C10	Peptides Liver_Rep1_36_C11	Peptides Liver_Rep1_37_C12	Peptides Liver_Rep1_38_D1	Peptides Liver_Rep1_39_D2	Peptides Liver_Rep1_40_D3	Peptides Liver_Rep1_41_D4	Peptides Liver_Rep1_42_D5	Peptides Liver_Rep1_43_D6	Peptides Liver_Rep1_44_D7	Peptides Liver_Rep1_45_D8	Peptides Liver_Rep1_46_D9	Peptides Liver_Rep1_47_D10	Peptides Liver_Rep1_48_D11	Peptides Liver_Rep1_49_D12	Peptides Liver_Rep1_50_E1	Peptides Liver_Rep1_51_E2	Peptides Liver_Rep1_52_E3	Peptides Liver_Rep1_53_E4	Peptides Liver_Rep1_54_E5	Peptides Liver_Rep1_55_E6	Peptides Liver_Rep1_56_E7	Peptides Liver_Rep1_57_E8	Peptides Liver_Rep1_58_E9	Peptides Liver_Rep1_59_E10	Peptides Liver_Rep1_60_E11	Peptides Liver_Rep1_61_E12	Peptides Liver_Rep1_62_F1	Peptides Liver_Rep1_63_F2	Peptides Liver_Rep1_64_F3	Peptides Liver_Rep1_65_F4	Peptides Liver_Rep1_66_F5	Peptides Liver_Rep1_67_F6	Peptides Liver_Rep1_68_F7	Peptides Liver_Rep1_69_F8	Peptides Liver_Rep1_70_F9	Peptides Liver_Rep1_71_F10	Peptides Liver_Rep1_72_F11	Peptides Liver_Rep1_73_F12	Peptides Liver_Rep1_74_G1	Peptides Liver_Rep1_75_G2	Peptides Liver_Rep1_76_G3	Peptides Liver_Rep1_77_G4	Peptides Liver_Rep1_78_G5	Peptides Liver_Rep2_31_C6	Peptides Liver_Rep2_32_C7	Peptides Liver_Rep2_33_C8	Peptides Liver_Rep2_34_C9	Peptides Liver_Rep2_35_C10	Peptides Liver_Rep2_36_C11	Peptides Liver_Rep2_37_C12	Peptides Liver_Rep2_38_D1	Peptides Liver_Rep2_39_D2	Peptides Liver_Rep2_40_D3	Peptides Liver_Rep2_41_D4	Peptides Liver_Rep2_42_D5	Peptides Liver_Rep2_43_D6	Peptides Liver_Rep2_44_D7	Peptides Liver_Rep2_45_D8	Peptides Liver_Rep2_46_D9	Peptides Liver_Rep2_47_D10	Peptides Liver_Rep2_48_D11	Peptides Liver_Rep2_49_D12	Peptides Liver_Rep2_50_E1	Peptides Liver_Rep2_51_E2	Peptides Liver_Rep2_52_E3	Peptides Liver_Rep2_53_E4	Peptides Liver_Rep2_54_E5	Peptides Liver_Rep2_55_E6	Peptides Liver_Rep2_56_E7	Peptides Liver_Rep2_57_E8	Peptides Liver_Rep2_58_E9	Peptides Liver_Rep2_59_E10	Peptides Liver_Rep2_60_E11	Peptides Liver_Rep2_61_E12	Peptides Liver_Rep2_62_F1	Peptides Liver_Rep2_63_F2	Peptides Liver_Rep2_64_F3	Peptides Liver_Rep2_65_F4	Peptides Liver_Rep2_66_F5	Peptides Liver_Rep2_67_F6	Peptides Liver_Rep2_68_F7	Peptides Liver_Rep2_69_F8	Peptides Liver_Rep2_70_F9	Peptides Liver_Rep2_71_F10	Peptides Liver_Rep2_72_F11	Peptides Liver_Rep2_73_F12	Peptides Liver_Rep2_74_G1	Peptides Liver_Rep2_75_G2	Peptides Liver_Rep2_76_G3	Peptides Liver_Rep2_77_G4	Peptides Liver_Rep2_78_G5	Peptides Liver_Rep3_31_C6	Peptides Liver_Rep3_32_C7	Peptides Liver_Rep3_33_C8	Peptides Liver_Rep3_34_C9	Peptides Liver_Rep3_35_C10	Peptides Liver_Rep3_36_C11	Peptides Liver_Rep3_37_C12	Peptides Liver_Rep3_38_D1	Peptides Liver_Rep3_39_D2	Peptides Liver_Rep3_40_D3	Peptides Liver_Rep3_41_D4	Peptides Liver_Rep3_42_D5	Peptides Liver_Rep3_43_D6	Peptides Liver_Rep3_44_D7	Peptides Liver_Rep3_45_D8	Peptides Liver_Rep3_46_D9	Peptides Liver_Rep3_47_D10	Peptides Liver_Rep3_48_D11	Peptides Liver_Rep3_49_D12	Peptides Liver_Rep3_50_E1	Peptides Liver_Rep3_51_E2	Peptides Liver_Rep3_52_E3	Peptides Liver_Rep3_53_E4	Peptides Liver_Rep3_54_E5	Peptides Liver_Rep3_55_E6	Peptides Liver_Rep3_56_E7	Peptides Liver_Rep3_57_E8	Peptides Liver_Rep3_58_E9	Peptides Liver_Rep3_59_E10	Peptides Liver_Rep3_60_E11	Peptides Liver_Rep3_61_E12	Peptides Liver_Rep3_62_F1	Peptides Liver_Rep3_63_F2	Peptides Liver_Rep3_64_F3	Peptides Liver_Rep3_65_F4	Peptides Liver_Rep3_66_F5	Peptides Liver_Rep3_67_F6	Peptides Liver_Rep3_68_F7	Peptides Liver_Rep3_69_F8	Peptides Liver_Rep3_70_F9	Peptides Liver_Rep3_71_F10	Peptides Liver_Rep3_72_F11	Peptides Liver_Rep3_73_F12	Peptides Liver_Rep3_74_G1	Peptides Liver_Rep3_75_G2	Peptides Liver_Rep3_76_G3	Peptides Liver_Rep3_77_G4	Peptides Liver_Rep3_78_G5	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc1 (2)	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc10	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc11	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc14	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc15	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc16	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc17	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc18	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc19	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc2 (2)	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc20	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc21	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc22	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc23	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc24	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc3 (2)	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc4 (2)	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc5 (2)	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc6	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc8	Razor + unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc9	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac1	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac10	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac11	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac12	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac13	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac14	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac15	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac16	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac17	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac18	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac19	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac2	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac20	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac21	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac22	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac23	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac24	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac3	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac4	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac5	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac6	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac7	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac8	Razor + unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac9	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc1	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc10	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc11	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc12	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc13	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc14	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc15	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc16	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc17	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc18	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc19	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc2	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc20	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc21	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc22	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc23	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc24	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc3	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc4	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc5	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc6	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc7	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc8	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc9	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc12	Razor + unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc13	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc1	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc10	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc11	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc12	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc13	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc14	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc15	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc16	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc17	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc18	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc19	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc2	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc20	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc21	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc22	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc23	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc24	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc3	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc4	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc5	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc6	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc7	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc8	Razor + unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc9	Razor + unique peptides 20161017_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc7	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F1	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F10_170503153643	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F11	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F12	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F13	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F14	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F15	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F16	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F17	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F18	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F19	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F2	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F20	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F21	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F22	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F23	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F24	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F3	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F4	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F5	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F6	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F7	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F8	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F9	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F1_170427224508	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F10	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F11	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F12	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F13	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F14	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F15	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F16	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F17	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F18	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F19	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F2_170427235251	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F20	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F21	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F22	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F23	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F24	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F3_170428010030	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F4_170428020817	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F5	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F6	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F7	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F8	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F9	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F1	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F10	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F11	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F12	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F13	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F14	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F15	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F16	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F17	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F18	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F19	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F2	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F20	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F21	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F22	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F23	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F24	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F3	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F4	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F5	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F6	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F7	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F8	Razor + unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F9	Razor + unique peptides Liver_Rep1_31_C6	Razor + unique peptides Liver_Rep1_32_C7	Razor + unique peptides Liver_Rep1_33_C8	Razor + unique peptides Liver_Rep1_34_C9	Razor + unique peptides Liver_Rep1_35_C10	Razor + unique peptides Liver_Rep1_36_C11	Razor + unique peptides Liver_Rep1_37_C12	Razor + unique peptides Liver_Rep1_38_D1	Razor + unique peptides Liver_Rep1_39_D2	Razor + unique peptides Liver_Rep1_40_D3	Razor + unique peptides Liver_Rep1_41_D4	Razor + unique peptides Liver_Rep1_42_D5	Razor + unique peptides Liver_Rep1_43_D6	Razor + unique peptides Liver_Rep1_44_D7	Razor + unique peptides Liver_Rep1_45_D8	Razor + unique peptides Liver_Rep1_46_D9	Razor + unique peptides Liver_Rep1_47_D10	Razor + unique peptides Liver_Rep1_48_D11	Razor + unique peptides Liver_Rep1_49_D12	Razor + unique peptides Liver_Rep1_50_E1	Razor + unique peptides Liver_Rep1_51_E2	Razor + unique peptides Liver_Rep1_52_E3	Razor + unique peptides Liver_Rep1_53_E4	Razor + unique peptides Liver_Rep1_54_E5	Razor + unique peptides Liver_Rep1_55_E6	Razor + unique peptides Liver_Rep1_56_E7	Razor + unique peptides Liver_Rep1_57_E8	Razor + unique peptides Liver_Rep1_58_E9	Razor + unique peptides Liver_Rep1_59_E10	Razor + unique peptides Liver_Rep1_60_E11	Razor + unique peptides Liver_Rep1_61_E12	Razor + unique peptides Liver_Rep1_62_F1	Razor + unique peptides Liver_Rep1_63_F2	Razor + unique peptides Liver_Rep1_64_F3	Razor + unique peptides Liver_Rep1_65_F4	Razor + unique peptides Liver_Rep1_66_F5	Razor + unique peptides Liver_Rep1_67_F6	Razor + unique peptides Liver_Rep1_68_F7	Razor + unique peptides Liver_Rep1_69_F8	Razor + unique peptides Liver_Rep1_70_F9	Razor + unique peptides Liver_Rep1_71_F10	Razor + unique peptides Liver_Rep1_72_F11	Razor + unique peptides Liver_Rep1_73_F12	Razor + unique peptides Liver_Rep1_74_G1	Razor + unique peptides Liver_Rep1_75_G2	Razor + unique peptides Liver_Rep1_76_G3	Razor + unique peptides Liver_Rep1_77_G4	Razor + unique peptides Liver_Rep1_78_G5	Razor + unique peptides Liver_Rep2_31_C6	Razor + unique peptides Liver_Rep2_32_C7	Razor + unique peptides Liver_Rep2_33_C8	Razor + unique peptides Liver_Rep2_34_C9	Razor + unique peptides Liver_Rep2_35_C10	Razor + unique peptides Liver_Rep2_36_C11	Razor + unique peptides Liver_Rep2_37_C12	Razor + unique peptides Liver_Rep2_38_D1	Razor + unique peptides Liver_Rep2_39_D2	Razor + unique peptides Liver_Rep2_40_D3	Razor + unique peptides Liver_Rep2_41_D4	Razor + unique peptides Liver_Rep2_42_D5	Razor + unique peptides Liver_Rep2_43_D6	Razor + unique peptides Liver_Rep2_44_D7	Razor + unique peptides Liver_Rep2_45_D8	Razor + unique peptides Liver_Rep2_46_D9	Razor + unique peptides Liver_Rep2_47_D10	Razor + unique peptides Liver_Rep2_48_D11	Razor + unique peptides Liver_Rep2_49_D12	Razor + unique peptides Liver_Rep2_50_E1	Razor + unique peptides Liver_Rep2_51_E2	Razor + unique peptides Liver_Rep2_52_E3	Razor + unique peptides Liver_Rep2_53_E4	Razor + unique peptides Liver_Rep2_54_E5	Razor + unique peptides Liver_Rep2_55_E6	Razor + unique peptides Liver_Rep2_56_E7	Razor + unique peptides Liver_Rep2_57_E8	Razor + unique peptides Liver_Rep2_58_E9	Razor + unique peptides Liver_Rep2_59_E10	Razor + unique peptides Liver_Rep2_60_E11	Razor + unique peptides Liver_Rep2_61_E12	Razor + unique peptides Liver_Rep2_62_F1	Razor + unique peptides Liver_Rep2_63_F2	Razor + unique peptides Liver_Rep2_64_F3	Razor + unique peptides Liver_Rep2_65_F4	Razor + unique peptides Liver_Rep2_66_F5	Razor + unique peptides Liver_Rep2_67_F6	Razor + unique peptides Liver_Rep2_68_F7	Razor + unique peptides Liver_Rep2_69_F8	Razor + unique peptides Liver_Rep2_70_F9	Razor + unique peptides Liver_Rep2_71_F10	Razor + unique peptides Liver_Rep2_72_F11	Razor + unique peptides Liver_Rep2_73_F12	Razor + unique peptides Liver_Rep2_74_G1	Razor + unique peptides Liver_Rep2_75_G2	Razor + unique peptides Liver_Rep2_76_G3	Razor + unique peptides Liver_Rep2_77_G4	Razor + unique peptides Liver_Rep2_78_G5	Razor + unique peptides Liver_Rep3_31_C6	Razor + unique peptides Liver_Rep3_32_C7	Razor + unique peptides Liver_Rep3_33_C8	Razor + unique peptides Liver_Rep3_34_C9	Razor + unique peptides Liver_Rep3_35_C10	Razor + unique peptides Liver_Rep3_36_C11	Razor + unique peptides Liver_Rep3_37_C12	Razor + unique peptides Liver_Rep3_38_D1	Razor + unique peptides Liver_Rep3_39_D2	Razor + unique peptides Liver_Rep3_40_D3	Razor + unique peptides Liver_Rep3_41_D4	Razor + unique peptides Liver_Rep3_42_D5	Razor + unique peptides Liver_Rep3_43_D6	Razor + unique peptides Liver_Rep3_44_D7	Razor + unique peptides Liver_Rep3_45_D8	Razor + unique peptides Liver_Rep3_46_D9	Razor + unique peptides Liver_Rep3_47_D10	Razor + unique peptides Liver_Rep3_48_D11	Razor + unique peptides Liver_Rep3_49_D12	Razor + unique peptides Liver_Rep3_50_E1	Razor + unique peptides Liver_Rep3_51_E2	Razor + unique peptides Liver_Rep3_52_E3	Razor + unique peptides Liver_Rep3_53_E4	Razor + unique peptides Liver_Rep3_54_E5	Razor + unique peptides Liver_Rep3_55_E6	Razor + unique peptides Liver_Rep3_56_E7	Razor + unique peptides Liver_Rep3_57_E8	Razor + unique peptides Liver_Rep3_58_E9	Razor + unique peptides Liver_Rep3_59_E10	Razor + unique peptides Liver_Rep3_60_E11	Razor + unique peptides Liver_Rep3_61_E12	Razor + unique peptides Liver_Rep3_62_F1	Razor + unique peptides Liver_Rep3_63_F2	Razor + unique peptides Liver_Rep3_64_F3	Razor + unique peptides Liver_Rep3_65_F4	Razor + unique peptides Liver_Rep3_66_F5	Razor + unique peptides Liver_Rep3_67_F6	Razor + unique peptides Liver_Rep3_68_F7	Razor + unique peptides Liver_Rep3_69_F8	Razor + unique peptides Liver_Rep3_70_F9	Razor + unique peptides Liver_Rep3_71_F10	Razor + unique peptides Liver_Rep3_72_F11	Razor + unique peptides Liver_Rep3_73_F12	Razor + unique peptides Liver_Rep3_74_G1	Razor + unique peptides Liver_Rep3_75_G2	Razor + unique peptides Liver_Rep3_76_G3	Razor + unique peptides Liver_Rep3_77_G4	Razor + unique peptides Liver_Rep3_78_G5	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc1 (2)	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc10	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc11	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc14	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc15	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc16	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc17	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc18	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc19	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc2 (2)	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc20	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc21	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc22	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc23	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc24	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc3 (2)	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc4 (2)	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc5 (2)	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc6	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc8	Unique peptides 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc9	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac1	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac10	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac11	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac12	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac13	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac14	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac15	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac16	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac17	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac18	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac19	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac2	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac20	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac21	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac22	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac23	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac24	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac3	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac4	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac5	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac6	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac7	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac8	Unique peptides 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac9	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc1	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc10	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc11	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc12	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc13	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc14	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc15	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc16	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc17	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc18	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc19	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc2	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc20	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc21	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc22	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc23	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc24	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc3	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc4	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc5	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc6	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc7	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc8	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc9	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc12	Unique peptides 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc13	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc1	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc10	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc11	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc12	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc13	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc14	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc15	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc16	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc17	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc18	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc19	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc2	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc20	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc21	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc22	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc23	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc24	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc3	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc4	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc5	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc6	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc7	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc8	Unique peptides 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc9	Unique peptides 20161017_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc7	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F1	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F10_170503153643	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F11	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F12	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F13	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F14	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F15	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F16	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F17	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F18	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F19	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F2	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F20	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F21	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F22	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F23	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F24	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F3	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F4	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F5	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F6	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F7	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F8	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F9	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F1_170427224508	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F10	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F11	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F12	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F13	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F14	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F15	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F16	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F17	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F18	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F19	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F2_170427235251	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F20	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F21	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F22	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F23	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F24	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F3_170428010030	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F4_170428020817	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F5	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F6	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F7	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F8	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F9	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F1	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F10	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F11	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F12	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F13	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F14	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F15	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F16	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F17	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F18	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F19	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F2	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F20	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F21	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F22	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F23	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F24	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F3	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F4	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F5	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F6	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F7	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F8	Unique peptides 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F9	Unique peptides Liver_Rep1_31_C6	Unique peptides Liver_Rep1_32_C7	Unique peptides Liver_Rep1_33_C8	Unique peptides Liver_Rep1_34_C9	Unique peptides Liver_Rep1_35_C10	Unique peptides Liver_Rep1_36_C11	Unique peptides Liver_Rep1_37_C12	Unique peptides Liver_Rep1_38_D1	Unique peptides Liver_Rep1_39_D2	Unique peptides Liver_Rep1_40_D3	Unique peptides Liver_Rep1_41_D4	Unique peptides Liver_Rep1_42_D5	Unique peptides Liver_Rep1_43_D6	Unique peptides Liver_Rep1_44_D7	Unique peptides Liver_Rep1_45_D8	Unique peptides Liver_Rep1_46_D9	Unique peptides Liver_Rep1_47_D10	Unique peptides Liver_Rep1_48_D11	Unique peptides Liver_Rep1_49_D12	Unique peptides Liver_Rep1_50_E1	Unique peptides Liver_Rep1_51_E2	Unique peptides Liver_Rep1_52_E3	Unique peptides Liver_Rep1_53_E4	Unique peptides Liver_Rep1_54_E5	Unique peptides Liver_Rep1_55_E6	Unique peptides Liver_Rep1_56_E7	Unique peptides Liver_Rep1_57_E8	Unique peptides Liver_Rep1_58_E9	Unique peptides Liver_Rep1_59_E10	Unique peptides Liver_Rep1_60_E11	Unique peptides Liver_Rep1_61_E12	Unique peptides Liver_Rep1_62_F1	Unique peptides Liver_Rep1_63_F2	Unique peptides Liver_Rep1_64_F3	Unique peptides Liver_Rep1_65_F4	Unique peptides Liver_Rep1_66_F5	Unique peptides Liver_Rep1_67_F6	Unique peptides Liver_Rep1_68_F7	Unique peptides Liver_Rep1_69_F8	Unique peptides Liver_Rep1_70_F9	Unique peptides Liver_Rep1_71_F10	Unique peptides Liver_Rep1_72_F11	Unique peptides Liver_Rep1_73_F12	Unique peptides Liver_Rep1_74_G1	Unique peptides Liver_Rep1_75_G2	Unique peptides Liver_Rep1_76_G3	Unique peptides Liver_Rep1_77_G4	Unique peptides Liver_Rep1_78_G5	Unique peptides Liver_Rep2_31_C6	Unique peptides Liver_Rep2_32_C7	Unique peptides Liver_Rep2_33_C8	Unique peptides Liver_Rep2_34_C9	Unique peptides Liver_Rep2_35_C10	Unique peptides Liver_Rep2_36_C11	Unique peptides Liver_Rep2_37_C12	Unique peptides Liver_Rep2_38_D1	Unique peptides Liver_Rep2_39_D2	Unique peptides Liver_Rep2_40_D3	Unique peptides Liver_Rep2_41_D4	Unique peptides Liver_Rep2_42_D5	Unique peptides Liver_Rep2_43_D6	Unique peptides Liver_Rep2_44_D7	Unique peptides Liver_Rep2_45_D8	Unique peptides Liver_Rep2_46_D9	Unique peptides Liver_Rep2_47_D10	Unique peptides Liver_Rep2_48_D11	Unique peptides Liver_Rep2_49_D12	Unique peptides Liver_Rep2_50_E1	Unique peptides Liver_Rep2_51_E2	Unique peptides Liver_Rep2_52_E3	Unique peptides Liver_Rep2_53_E4	Unique peptides Liver_Rep2_54_E5	Unique peptides Liver_Rep2_55_E6	Unique peptides Liver_Rep2_56_E7	Unique peptides Liver_Rep2_57_E8	Unique peptides Liver_Rep2_58_E9	Unique peptides Liver_Rep2_59_E10	Unique peptides Liver_Rep2_60_E11	Unique peptides Liver_Rep2_61_E12	Unique peptides Liver_Rep2_62_F1	Unique peptides Liver_Rep2_63_F2	Unique peptides Liver_Rep2_64_F3	Unique peptides Liver_Rep2_65_F4	Unique peptides Liver_Rep2_66_F5	Unique peptides Liver_Rep2_67_F6	Unique peptides Liver_Rep2_68_F7	Unique peptides Liver_Rep2_69_F8	Unique peptides Liver_Rep2_70_F9	Unique peptides Liver_Rep2_71_F10	Unique peptides Liver_Rep2_72_F11	Unique peptides Liver_Rep2_73_F12	Unique peptides Liver_Rep2_74_G1	Unique peptides Liver_Rep2_75_G2	Unique peptides Liver_Rep2_76_G3	Unique peptides Liver_Rep2_77_G4	Unique peptides Liver_Rep2_78_G5	Unique peptides Liver_Rep3_31_C6	Unique peptides Liver_Rep3_32_C7	Unique peptides Liver_Rep3_33_C8	Unique peptides Liver_Rep3_34_C9	Unique peptides Liver_Rep3_35_C10	Unique peptides Liver_Rep3_36_C11	Unique peptides Liver_Rep3_37_C12	Unique peptides Liver_Rep3_38_D1	Unique peptides Liver_Rep3_39_D2	Unique peptides Liver_Rep3_40_D3	Unique peptides Liver_Rep3_41_D4	Unique peptides Liver_Rep3_42_D5	Unique peptides Liver_Rep3_43_D6	Unique peptides Liver_Rep3_44_D7	Unique peptides Liver_Rep3_45_D8	Unique peptides Liver_Rep3_46_D9	Unique peptides Liver_Rep3_47_D10	Unique peptides Liver_Rep3_48_D11	Unique peptides Liver_Rep3_49_D12	Unique peptides Liver_Rep3_50_E1	Unique peptides Liver_Rep3_51_E2	Unique peptides Liver_Rep3_52_E3	Unique peptides Liver_Rep3_53_E4	Unique peptides Liver_Rep3_54_E5	Unique peptides Liver_Rep3_55_E6	Unique peptides Liver_Rep3_56_E7	Unique peptides Liver_Rep3_57_E8	Unique peptides Liver_Rep3_58_E9	Unique peptides Liver_Rep3_59_E10	Unique peptides Liver_Rep3_60_E11	Unique peptides Liver_Rep3_61_E12	Unique peptides Liver_Rep3_62_F1	Unique peptides Liver_Rep3_63_F2	Unique peptides Liver_Rep3_64_F3	Unique peptides Liver_Rep3_65_F4	Unique peptides Liver_Rep3_66_F5	Unique peptides Liver_Rep3_67_F6	Unique peptides Liver_Rep3_68_F7	Unique peptides Liver_Rep3_69_F8	Unique peptides Liver_Rep3_70_F9	Unique peptides Liver_Rep3_71_F10	Unique peptides Liver_Rep3_72_F11	Unique peptides Liver_Rep3_73_F12	Unique peptides Liver_Rep3_74_G1	Unique peptides Liver_Rep3_75_G2	Unique peptides Liver_Rep3_76_G3	Unique peptides Liver_Rep3_77_G4	Unique peptides Liver_Rep3_78_G5	Sequence coverage [%]	Unique + razor sequence coverage [%]	Unique sequence coverage [%]	Mol. weight [kDa]	Sequence length	Sequence lengths	Q-value	Score	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc1 (2)	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc10	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc11	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc14	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc15	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc16	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc17	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc18	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc19	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc2 (2)	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc20	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc21	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc22	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc23	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc24	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc3 (2)	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc4 (2)	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc5 (2)	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc6	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc8	Identification type 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc9	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac1	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac10	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac11	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac12	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac13	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac14	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac15	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac16	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac17	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac18	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac19	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac2	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac20	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac21	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac22	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac23	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac24	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac3	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac4	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac5	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac6	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac7	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac8	Identification type 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac9	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc1	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc10	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc11	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc12	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc13	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc14	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc15	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc16	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc17	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc18	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc19	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc2	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc20	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc21	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc22	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc23	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc24	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc3	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc4	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc5	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc6	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc7	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc8	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc9	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc12	Identification type 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc13	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc1	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc10	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc11	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc12	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc13	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc14	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc15	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc16	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc17	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc18	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc19	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc2	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc20	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc21	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc22	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc23	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc24	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc3	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc4	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc5	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc6	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc7	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc8	Identification type 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc9	Identification type 20161017_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc7	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F1	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F10_170503153643	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F11	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F12	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F13	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F14	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F15	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F16	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F17	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F18	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F19	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F2	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F20	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F21	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F22	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F23	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F24	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F3	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F4	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F5	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F6	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F7	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F8	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F9	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F1_170427224508	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F10	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F11	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F12	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F13	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F14	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F15	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F16	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F17	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F18	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F19	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F2_170427235251	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F20	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F21	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F22	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F23	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F24	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F3_170428010030	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F4_170428020817	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F5	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F6	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F7	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F8	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F9	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F1	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F10	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F11	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F12	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F13	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F14	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F15	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F16	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F17	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F18	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F19	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F2	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F20	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F21	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F22	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F23	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F24	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F3	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F4	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F5	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F6	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F7	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F8	Identification type 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F9	Identification type Liver_Rep1_31_C6	Identification type Liver_Rep1_32_C7	Identification type Liver_Rep1_33_C8	Identification type Liver_Rep1_34_C9	Identification type Liver_Rep1_35_C10	Identification type Liver_Rep1_36_C11	Identification type Liver_Rep1_37_C12	Identification type Liver_Rep1_38_D1	Identification type Liver_Rep1_39_D2	Identification type Liver_Rep1_40_D3	Identification type Liver_Rep1_41_D4	Identification type Liver_Rep1_42_D5	Identification type Liver_Rep1_43_D6	Identification type Liver_Rep1_44_D7	Identification type Liver_Rep1_45_D8	Identification type Liver_Rep1_46_D9	Identification type Liver_Rep1_47_D10	Identification type Liver_Rep1_48_D11	Identification type Liver_Rep1_49_D12	Identification type Liver_Rep1_50_E1	Identification type Liver_Rep1_51_E2	Identification type Liver_Rep1_52_E3	Identification type Liver_Rep1_53_E4	Identification type Liver_Rep1_54_E5	Identification type Liver_Rep1_55_E6	Identification type Liver_Rep1_56_E7	Identification type Liver_Rep1_57_E8	Identification type Liver_Rep1_58_E9	Identification type Liver_Rep1_59_E10	Identification type Liver_Rep1_60_E11	Identification type Liver_Rep1_61_E12	Identification type Liver_Rep1_62_F1	Identification type Liver_Rep1_63_F2	Identification type Liver_Rep1_64_F3	Identification type Liver_Rep1_65_F4	Identification type Liver_Rep1_66_F5	Identification type Liver_Rep1_67_F6	Identification type Liver_Rep1_68_F7	Identification type Liver_Rep1_69_F8	Identification type Liver_Rep1_70_F9	Identification type Liver_Rep1_71_F10	Identification type Liver_Rep1_72_F11	Identification type Liver_Rep1_73_F12	Identification type Liver_Rep1_74_G1	Identification type Liver_Rep1_75_G2	Identification type Liver_Rep1_76_G3	Identification type Liver_Rep1_77_G4	Identification type Liver_Rep1_78_G5	Identification type Liver_Rep2_31_C6	Identification type Liver_Rep2_32_C7	Identification type Liver_Rep2_33_C8	Identification type Liver_Rep2_34_C9	Identification type Liver_Rep2_35_C10	Identification type Liver_Rep2_36_C11	Identification type Liver_Rep2_37_C12	Identification type Liver_Rep2_38_D1	Identification type Liver_Rep2_39_D2	Identification type Liver_Rep2_40_D3	Identification type Liver_Rep2_41_D4	Identification type Liver_Rep2_42_D5	Identification type Liver_Rep2_43_D6	Identification type Liver_Rep2_44_D7	Identification type Liver_Rep2_45_D8	Identification type Liver_Rep2_46_D9	Identification type Liver_Rep2_47_D10	Identification type Liver_Rep2_48_D11	Identification type Liver_Rep2_49_D12	Identification type Liver_Rep2_50_E1	Identification type Liver_Rep2_51_E2	Identification type Liver_Rep2_52_E3	Identification type Liver_Rep2_53_E4	Identification type Liver_Rep2_54_E5	Identification type Liver_Rep2_55_E6	Identification type Liver_Rep2_56_E7	Identification type Liver_Rep2_57_E8	Identification type Liver_Rep2_58_E9	Identification type Liver_Rep2_59_E10	Identification type Liver_Rep2_60_E11	Identification type Liver_Rep2_61_E12	Identification type Liver_Rep2_62_F1	Identification type Liver_Rep2_63_F2	Identification type Liver_Rep2_64_F3	Identification type Liver_Rep2_65_F4	Identification type Liver_Rep2_66_F5	Identification type Liver_Rep2_67_F6	Identification type Liver_Rep2_68_F7	Identification type Liver_Rep2_69_F8	Identification type Liver_Rep2_70_F9	Identification type Liver_Rep2_71_F10	Identification type Liver_Rep2_72_F11	Identification type Liver_Rep2_73_F12	Identification type Liver_Rep2_74_G1	Identification type Liver_Rep2_75_G2	Identification type Liver_Rep2_76_G3	Identification type Liver_Rep2_77_G4	Identification type Liver_Rep2_78_G5	Identification type Liver_Rep3_31_C6	Identification type Liver_Rep3_32_C7	Identification type Liver_Rep3_33_C8	Identification type Liver_Rep3_34_C9	Identification type Liver_Rep3_35_C10	Identification type Liver_Rep3_36_C11	Identification type Liver_Rep3_37_C12	Identification type Liver_Rep3_38_D1	Identification type Liver_Rep3_39_D2	Identification type Liver_Rep3_40_D3	Identification type Liver_Rep3_41_D4	Identification type Liver_Rep3_42_D5	Identification type Liver_Rep3_43_D6	Identification type Liver_Rep3_44_D7	Identification type Liver_Rep3_45_D8	Identification type Liver_Rep3_46_D9	Identification type Liver_Rep3_47_D10	Identification type Liver_Rep3_48_D11	Identification type Liver_Rep3_49_D12	Identification type Liver_Rep3_50_E1	Identification type Liver_Rep3_51_E2	Identification type Liver_Rep3_52_E3	Identification type Liver_Rep3_53_E4	Identification type Liver_Rep3_54_E5	Identification type Liver_Rep3_55_E6	Identification type Liver_Rep3_56_E7	Identification type Liver_Rep3_57_E8	Identification type Liver_Rep3_58_E9	Identification type Liver_Rep3_59_E10	Identification type Liver_Rep3_60_E11	Identification type Liver_Rep3_61_E12	Identification type Liver_Rep3_62_F1	Identification type Liver_Rep3_63_F2	Identification type Liver_Rep3_64_F3	Identification type Liver_Rep3_65_F4	Identification type Liver_Rep3_66_F5	Identification type Liver_Rep3_67_F6	Identification type Liver_Rep3_68_F7	Identification type Liver_Rep3_69_F8	Identification type Liver_Rep3_70_F9	Identification type Liver_Rep3_71_F10	Identification type Liver_Rep3_72_F11	Identification type Liver_Rep3_73_F12	Identification type Liver_Rep3_74_G1	Identification type Liver_Rep3_75_G2	Identification type Liver_Rep3_76_G3	Identification type Liver_Rep3_77_G4	Identification type Liver_Rep3_78_G5	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc1 (2) [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc10 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc11 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc14 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc15 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc16 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc17 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc18 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc19 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc2 (2) [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc20 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc21 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc22 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc23 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc24 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc3 (2) [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc4 (2) [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc5 (2) [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc6 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc8 [%]	Sequence coverage 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc9 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac1 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac10 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac11 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac12 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac13 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac14 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac15 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac16 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac17 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac18 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac19 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac2 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac20 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac21 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac22 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac23 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac24 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac3 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac4 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac5 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac6 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac7 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac8 [%]	Sequence coverage 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac9 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc1 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc10 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc11 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc12 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc13 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc14 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc15 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc16 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc17 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc18 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc19 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc2 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc20 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc21 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc22 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc23 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc24 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc3 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc4 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc5 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc6 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc7 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc8 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc9 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc12 [%]	Sequence coverage 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc13 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc1 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc10 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc11 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc12 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc13 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc14 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc15 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc16 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc17 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc18 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc19 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc2 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc20 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc21 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc22 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc23 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc24 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc3 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc4 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc5 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc6 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc7 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc8 [%]	Sequence coverage 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc9 [%]	Sequence coverage 20161017_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc7 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F1 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F10_170503153643 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F11 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F12 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F13 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F14 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F15 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F16 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F17 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F18 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F19 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F2 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F20 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F21 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F22 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F23 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F24 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F3 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F4 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F5 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F6 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F7 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F8 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F9 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F1_170427224508 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F10 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F11 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F12 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F13 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F14 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F15 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F16 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F17 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F18 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F19 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F2_170427235251 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F20 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F21 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F22 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F23 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F24 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F3_170428010030 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F4_170428020817 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F5 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F6 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F7 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F8 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F9 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F1 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F10 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F11 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F12 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F13 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F14 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F15 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F16 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F17 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F18 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F19 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F2 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F20 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F21 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F22 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F23 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F24 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F3 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F4 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F5 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F6 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F7 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F8 [%]	Sequence coverage 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F9 [%]	Sequence coverage Liver_Rep1_31_C6 [%]	Sequence coverage Liver_Rep1_32_C7 [%]	Sequence coverage Liver_Rep1_33_C8 [%]	Sequence coverage Liver_Rep1_34_C9 [%]	Sequence coverage Liver_Rep1_35_C10 [%]	Sequence coverage Liver_Rep1_36_C11 [%]	Sequence coverage Liver_Rep1_37_C12 [%]	Sequence coverage Liver_Rep1_38_D1 [%]	Sequence coverage Liver_Rep1_39_D2 [%]	Sequence coverage Liver_Rep1_40_D3 [%]	Sequence coverage Liver_Rep1_41_D4 [%]	Sequence coverage Liver_Rep1_42_D5 [%]	Sequence coverage Liver_Rep1_43_D6 [%]	Sequence coverage Liver_Rep1_44_D7 [%]	Sequence coverage Liver_Rep1_45_D8 [%]	Sequence coverage Liver_Rep1_46_D9 [%]	Sequence coverage Liver_Rep1_47_D10 [%]	Sequence coverage Liver_Rep1_48_D11 [%]	Sequence coverage Liver_Rep1_49_D12 [%]	Sequence coverage Liver_Rep1_50_E1 [%]	Sequence coverage Liver_Rep1_51_E2 [%]	Sequence coverage Liver_Rep1_52_E3 [%]	Sequence coverage Liver_Rep1_53_E4 [%]	Sequence coverage Liver_Rep1_54_E5 [%]	Sequence coverage Liver_Rep1_55_E6 [%]	Sequence coverage Liver_Rep1_56_E7 [%]	Sequence coverage Liver_Rep1_57_E8 [%]	Sequence coverage Liver_Rep1_58_E9 [%]	Sequence coverage Liver_Rep1_59_E10 [%]	Sequence coverage Liver_Rep1_60_E11 [%]	Sequence coverage Liver_Rep1_61_E12 [%]	Sequence coverage Liver_Rep1_62_F1 [%]	Sequence coverage Liver_Rep1_63_F2 [%]	Sequence coverage Liver_Rep1_64_F3 [%]	Sequence coverage Liver_Rep1_65_F4 [%]	Sequence coverage Liver_Rep1_66_F5 [%]	Sequence coverage Liver_Rep1_67_F6 [%]	Sequence coverage Liver_Rep1_68_F7 [%]	Sequence coverage Liver_Rep1_69_F8 [%]	Sequence coverage Liver_Rep1_70_F9 [%]	Sequence coverage Liver_Rep1_71_F10 [%]	Sequence coverage Liver_Rep1_72_F11 [%]	Sequence coverage Liver_Rep1_73_F12 [%]	Sequence coverage Liver_Rep1_74_G1 [%]	Sequence coverage Liver_Rep1_75_G2 [%]	Sequence coverage Liver_Rep1_76_G3 [%]	Sequence coverage Liver_Rep1_77_G4 [%]	Sequence coverage Liver_Rep1_78_G5 [%]	Sequence coverage Liver_Rep2_31_C6 [%]	Sequence coverage Liver_Rep2_32_C7 [%]	Sequence coverage Liver_Rep2_33_C8 [%]	Sequence coverage Liver_Rep2_34_C9 [%]	Sequence coverage Liver_Rep2_35_C10 [%]	Sequence coverage Liver_Rep2_36_C11 [%]	Sequence coverage Liver_Rep2_37_C12 [%]	Sequence coverage Liver_Rep2_38_D1 [%]	Sequence coverage Liver_Rep2_39_D2 [%]	Sequence coverage Liver_Rep2_40_D3 [%]	Sequence coverage Liver_Rep2_41_D4 [%]	Sequence coverage Liver_Rep2_42_D5 [%]	Sequence coverage Liver_Rep2_43_D6 [%]	Sequence coverage Liver_Rep2_44_D7 [%]	Sequence coverage Liver_Rep2_45_D8 [%]	Sequence coverage Liver_Rep2_46_D9 [%]	Sequence coverage Liver_Rep2_47_D10 [%]	Sequence coverage Liver_Rep2_48_D11 [%]	Sequence coverage Liver_Rep2_49_D12 [%]	Sequence coverage Liver_Rep2_50_E1 [%]	Sequence coverage Liver_Rep2_51_E2 [%]	Sequence coverage Liver_Rep2_52_E3 [%]	Sequence coverage Liver_Rep2_53_E4 [%]	Sequence coverage Liver_Rep2_54_E5 [%]	Sequence coverage Liver_Rep2_55_E6 [%]	Sequence coverage Liver_Rep2_56_E7 [%]	Sequence coverage Liver_Rep2_57_E8 [%]	Sequence coverage Liver_Rep2_58_E9 [%]	Sequence coverage Liver_Rep2_59_E10 [%]	Sequence coverage Liver_Rep2_60_E11 [%]	Sequence coverage Liver_Rep2_61_E12 [%]	Sequence coverage Liver_Rep2_62_F1 [%]	Sequence coverage Liver_Rep2_63_F2 [%]	Sequence coverage Liver_Rep2_64_F3 [%]	Sequence coverage Liver_Rep2_65_F4 [%]	Sequence coverage Liver_Rep2_66_F5 [%]	Sequence coverage Liver_Rep2_67_F6 [%]	Sequence coverage Liver_Rep2_68_F7 [%]	Sequence coverage Liver_Rep2_69_F8 [%]	Sequence coverage Liver_Rep2_70_F9 [%]	Sequence coverage Liver_Rep2_71_F10 [%]	Sequence coverage Liver_Rep2_72_F11 [%]	Sequence coverage Liver_Rep2_73_F12 [%]	Sequence coverage Liver_Rep2_74_G1 [%]	Sequence coverage Liver_Rep2_75_G2 [%]	Sequence coverage Liver_Rep2_76_G3 [%]	Sequence coverage Liver_Rep2_77_G4 [%]	Sequence coverage Liver_Rep2_78_G5 [%]	Sequence coverage Liver_Rep3_31_C6 [%]	Sequence coverage Liver_Rep3_32_C7 [%]	Sequence coverage Liver_Rep3_33_C8 [%]	Sequence coverage Liver_Rep3_34_C9 [%]	Sequence coverage Liver_Rep3_35_C10 [%]	Sequence coverage Liver_Rep3_36_C11 [%]	Sequence coverage Liver_Rep3_37_C12 [%]	Sequence coverage Liver_Rep3_38_D1 [%]	Sequence coverage Liver_Rep3_39_D2 [%]	Sequence coverage Liver_Rep3_40_D3 [%]	Sequence coverage Liver_Rep3_41_D4 [%]	Sequence coverage Liver_Rep3_42_D5 [%]	Sequence coverage Liver_Rep3_43_D6 [%]	Sequence coverage Liver_Rep3_44_D7 [%]	Sequence coverage Liver_Rep3_45_D8 [%]	Sequence coverage Liver_Rep3_46_D9 [%]	Sequence coverage Liver_Rep3_47_D10 [%]	Sequence coverage Liver_Rep3_48_D11 [%]	Sequence coverage Liver_Rep3_49_D12 [%]	Sequence coverage Liver_Rep3_50_E1 [%]	Sequence coverage Liver_Rep3_51_E2 [%]	Sequence coverage Liver_Rep3_52_E3 [%]	Sequence coverage Liver_Rep3_53_E4 [%]	Sequence coverage Liver_Rep3_54_E5 [%]	Sequence coverage Liver_Rep3_55_E6 [%]	Sequence coverage Liver_Rep3_56_E7 [%]	Sequence coverage Liver_Rep3_57_E8 [%]	Sequence coverage Liver_Rep3_58_E9 [%]	Sequence coverage Liver_Rep3_59_E10 [%]	Sequence coverage Liver_Rep3_60_E11 [%]	Sequence coverage Liver_Rep3_61_E12 [%]	Sequence coverage Liver_Rep3_62_F1 [%]	Sequence coverage Liver_Rep3_63_F2 [%]	Sequence coverage Liver_Rep3_64_F3 [%]	Sequence coverage Liver_Rep3_65_F4 [%]	Sequence coverage Liver_Rep3_66_F5 [%]	Sequence coverage Liver_Rep3_67_F6 [%]	Sequence coverage Liver_Rep3_68_F7 [%]	Sequence coverage Liver_Rep3_69_F8 [%]	Sequence coverage Liver_Rep3_70_F9 [%]	Sequence coverage Liver_Rep3_71_F10 [%]	Sequence coverage Liver_Rep3_72_F11 [%]	Sequence coverage Liver_Rep3_73_F12 [%]	Sequence coverage Liver_Rep3_74_G1 [%]	Sequence coverage Liver_Rep3_75_G2 [%]	Sequence coverage Liver_Rep3_76_G3 [%]	Sequence coverage Liver_Rep3_77_G4 [%]	Sequence coverage Liver_Rep3_78_G5 [%]	Intensity	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc1 (2)	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc10	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc11	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc14	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc15	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc16	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc17	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc18	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc19	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc2 (2)	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc20	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc21	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc22	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc23	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc24	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc3 (2)	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc4 (2)	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc5 (2)	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc6	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc8	Intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc9	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac1	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac10	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac11	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac12	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac13	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac14	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac15	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac16	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac17	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac18	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac19	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac2	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac20	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac21	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac22	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac23	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac24	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac3	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac4	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac5	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac6	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac7	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac8	Intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac9	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc1	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc10	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc11	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc12	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc13	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc14	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc15	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc16	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc17	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc18	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc19	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc2	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc20	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc21	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc22	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc23	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc24	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc3	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc4	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc5	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc6	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc7	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc8	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc9	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc12	Intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc13	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc1	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc10	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc11	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc12	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc13	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc14	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc15	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc16	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc17	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc18	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc19	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc2	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc20	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc21	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc22	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc23	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc24	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc3	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc4	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc5	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc6	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc7	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc8	Intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc9	Intensity 20161017_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc7	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F1	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F10_170503153643	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F11	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F12	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F13	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F14	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F15	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F16	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F17	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F18	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F19	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F2	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F20	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F21	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F22	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F23	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F24	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F3	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F4	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F5	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F6	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F7	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F8	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F9	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F1_170427224508	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F10	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F11	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F12	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F13	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F14	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F15	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F16	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F17	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F18	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F19	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F2_170427235251	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F20	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F21	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F22	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F23	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F24	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F3_170428010030	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F4_170428020817	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F5	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F6	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F7	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F8	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F9	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F1	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F10	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F11	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F12	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F13	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F14	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F15	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F16	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F17	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F18	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F19	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F2	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F20	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F21	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F22	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F23	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F24	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F3	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F4	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F5	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F6	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F7	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F8	Intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F9	Intensity 1_31_C6	Intensity 1_32_C7	Intensity 1_33_C8	Intensity 1_34_C9	Intensity 1_35_C10	Intensity 1_36_C11	Intensity 1_37_C12	Intensity 1_38_D1	Intensity 1_39_D2	Intensity 1_40_D3	Intensity 1_41_D4	Intensity 1_42_D5	Intensity 1_43_D6	Intensity 1_44_D7	Intensity 1_45_D8	Intensity 1_46_D9	Intensity 1_47_D10	Intensity 1_48_D11	Intensity 1_49_D12	Intensity 1_50_E1	Intensity 1_51_E2	Intensity 1_52_E3	Intensity 1_53_E4	Intensity 1_54_E5	Intensity 1_55_E6	Intensity 1_56_E7	Intensity 1_57_E8	Intensity 1_58_E9	Intensity 1_59_E10	Intensity 1_60_E11	Intensity 1_61_E12	Intensity 1_62_F1	Intensity 1_63_F2	Intensity 1_64_F3	Intensity 1_65_F4	Intensity 1_66_F5	Intensity 1_67_F6	Intensity 1_68_F7	Intensity 1_69_F8	Intensity 1_70_F9	Intensity 1_71_F10	Intensity 1_72_F11	Intensity 1_73_F12	Intensity 1_74_G1	Intensity 1_75_G2	Intensity 1_76_G3	Intensity 1_77_G4	Intensity 1_78_G5	Intensity 2_31_C6	Intensity 2_32_C7	Intensity 2_33_C8	Intensity 2_34_C9	Intensity 2_35_C10	Intensity 2_36_C11	Intensity 2_37_C12	Intensity 2_38_D1	Intensity 2_39_D2	Intensity 2_40_D3	Intensity 2_41_D4	Intensity 2_42_D5	Intensity 2_43_D6	Intensity 2_44_D7	Intensity 2_45_D8	Intensity 2_46_D9	Intensity 2_47_D10	Intensity 2_48_D11	Intensity 2_49_D12	Intensity 2_50_E1	Intensity 2_51_E2	Intensity 2_52_E3	Intensity 2_53_E4	Intensity 2_54_E5	Intensity 2_55_E6	Intensity 2_56_E7	Intensity 2_57_E8	Intensity 2_58_E9	Intensity 2_59_E10	Intensity 2_60_E11	Intensity 2_61_E12	Intensity 2_62_F1	Intensity 2_63_F2	Intensity 2_64_F3	Intensity 2_65_F4	Intensity 2_66_F5	Intensity 2_67_F6	Intensity 2_68_F7	Intensity 2_69_F8	Intensity 2_70_F9	Intensity 2_71_F10	Intensity 2_72_F11	Intensity 2_73_F12	Intensity 2_74_G1	Intensity 2_75_G2	Intensity 2_76_G3	Intensity 2_77_G4	Intensity 2_78_G5	Intensity 3_31_C6	Intensity 3_32_C7	Intensity 3_33_C8	Intensity 3_34_C9	Intensity 3_35_C10	Intensity 3_36_C11	Intensity 3_37_C12	Intensity 3_38_D1	Intensity 3_39_D2	Intensity 3_40_D3	Intensity 3_41_D4	Intensity 3_42_D5	Intensity 3_43_D6	Intensity 3_44_D7	Intensity 3_45_D8	Intensity 3_46_D9	Intensity 3_47_D10	Intensity 3_48_D11	Intensity 3_49_D12	Intensity 3_50_E1	Intensity 3_51_E2	Intensity 3_52_E3	Intensity 3_53_E4	Intensity 3_54_E5	Intensity 3_55_E6	Intensity 3_56_E7	Intensity 3_57_E8	Intensity 3_58_E9	Intensity 3_59_E10	Intensity 3_60_E11	Intensity 3_61_E12	Intensity 3_62_F1	Intensity 3_63_F2	Intensity 3_64_F3	Intensity 3_65_F4	Intensity 3_66_F5	Intensity 3_67_F6	Intensity 3_68_F7	Intensity 3_69_F8	Intensity 3_70_F9	Intensity 3_71_F10	Intensity 3_72_F11	Intensity 3_73_F12	Intensity 3_74_G1	Intensity 3_75_G2	Intensity 3_76_G3	Intensity 3_77_G4	Intensity 3_78_G5	LFQ intensity 1_31_C6	LFQ intensity 1_32_C7	LFQ intensity 1_33_C8	LFQ intensity 1_34_C9	LFQ intensity 1_35_C10	LFQ intensity 1_36_C11	LFQ intensity 1_37_C12	LFQ intensity 1_38_D1	LFQ intensity 1_39_D2	LFQ intensity 1_40_D3	LFQ intensity 1_41_D4	LFQ intensity 1_42_D5	LFQ intensity 1_43_D6	LFQ intensity 1_44_D7	LFQ intensity 1_45_D8	LFQ intensity 1_46_D9	LFQ intensity 1_47_D10	LFQ intensity 1_48_D11	LFQ intensity 1_49_D12	LFQ intensity 1_50_E1	LFQ intensity 1_51_E2	LFQ intensity 1_52_E3	LFQ intensity 1_53_E4	LFQ intensity 1_54_E5	LFQ intensity 1_55_E6	LFQ intensity 1_56_E7	LFQ intensity 1_57_E8	LFQ intensity 1_58_E9	LFQ intensity 1_59_E10	LFQ intensity 1_60_E11	LFQ intensity 1_61_E12	LFQ intensity 1_62_F1	LFQ intensity 1_63_F2	LFQ intensity 1_64_F3	LFQ intensity 1_65_F4	LFQ intensity 1_66_F5	LFQ intensity 1_67_F6	LFQ intensity 1_68_F7	LFQ intensity 1_69_F8	LFQ intensity 1_70_F9	LFQ intensity 1_71_F10	LFQ intensity 1_72_F11	LFQ intensity 1_73_F12	LFQ intensity 1_74_G1	LFQ intensity 1_75_G2	LFQ intensity 1_76_G3	LFQ intensity 1_77_G4	LFQ intensity 1_78_G5	LFQ intensity 2_31_C6	LFQ intensity 2_32_C7	LFQ intensity 2_33_C8	LFQ intensity 2_34_C9	LFQ intensity 2_35_C10	LFQ intensity 2_36_C11	LFQ intensity 2_37_C12	LFQ intensity 2_38_D1	LFQ intensity 2_39_D2	LFQ intensity 2_40_D3	LFQ intensity 2_41_D4	LFQ intensity 2_42_D5	LFQ intensity 2_43_D6	LFQ intensity 2_44_D7	LFQ intensity 2_45_D8	LFQ intensity 2_46_D9	LFQ intensity 2_47_D10	LFQ intensity 2_48_D11	LFQ intensity 2_49_D12	LFQ intensity 2_50_E1	LFQ intensity 2_51_E2	LFQ intensity 2_52_E3	LFQ intensity 2_53_E4	LFQ intensity 2_54_E5	LFQ intensity 2_55_E6	LFQ intensity 2_56_E7	LFQ intensity 2_57_E8	LFQ intensity 2_58_E9	LFQ intensity 2_59_E10	LFQ intensity 2_60_E11	LFQ intensity 2_61_E12	LFQ intensity 2_62_F1	LFQ intensity 2_63_F2	LFQ intensity 2_64_F3	LFQ intensity 2_65_F4	LFQ intensity 2_66_F5	LFQ intensity 2_67_F6	LFQ intensity 2_68_F7	LFQ intensity 2_69_F8	LFQ intensity 2_70_F9	LFQ intensity 2_71_F10	LFQ intensity 2_72_F11	LFQ intensity 2_73_F12	LFQ intensity 2_74_G1	LFQ intensity 2_75_G2	LFQ intensity 2_76_G3	LFQ intensity 2_77_G4	LFQ intensity 2_78_G5	LFQ intensity 3_31_C6	LFQ intensity 3_32_C7	LFQ intensity 3_33_C8	LFQ intensity 3_34_C9	LFQ intensity 3_35_C10	LFQ intensity 3_36_C11	LFQ intensity 3_37_C12	LFQ intensity 3_38_D1	LFQ intensity 3_39_D2	LFQ intensity 3_40_D3	LFQ intensity 3_41_D4	LFQ intensity 3_42_D5	LFQ intensity 3_43_D6	LFQ intensity 3_44_D7	LFQ intensity 3_45_D8	LFQ intensity 3_46_D9	LFQ intensity 3_47_D10	LFQ intensity 3_48_D11	LFQ intensity 3_49_D12	LFQ intensity 3_50_E1	LFQ intensity 3_51_E2	LFQ intensity 3_52_E3	LFQ intensity 3_53_E4	LFQ intensity 3_54_E5	LFQ intensity 3_55_E6	LFQ intensity 3_56_E7	LFQ intensity 3_57_E8	LFQ intensity 3_58_E9	LFQ intensity 3_59_E10	LFQ intensity 3_60_E11	LFQ intensity 3_61_E12	LFQ intensity 3_62_F1	LFQ intensity 3_63_F2	LFQ intensity 3_64_F3	LFQ intensity 3_65_F4	LFQ intensity 3_66_F5	LFQ intensity 3_67_F6	LFQ intensity 3_68_F7	LFQ intensity 3_69_F8	LFQ intensity 3_70_F9	LFQ intensity 3_71_F10	LFQ intensity 3_72_F11	LFQ intensity 3_73_F12	LFQ intensity 3_74_G1	LFQ intensity 3_75_G2	LFQ intensity 3_76_G3	LFQ intensity 3_77_G4	LFQ intensity 3_78_G5	MS/MS count Liver_Rep1_31_C6	MS/MS count Liver_Rep1_32_C7	MS/MS count Liver_Rep1_33_C8	MS/MS count Liver_Rep1_34_C9	MS/MS count Liver_Rep1_35_C10	MS/MS count Liver_Rep1_36_C11	MS/MS count Liver_Rep1_37_C12	MS/MS count Liver_Rep1_38_D1	MS/MS count Liver_Rep1_39_D2	MS/MS count Liver_Rep1_40_D3	MS/MS count Liver_Rep1_41_D4	MS/MS count Liver_Rep1_42_D5	MS/MS count Liver_Rep1_43_D6	MS/MS count Liver_Rep1_44_D7	MS/MS count Liver_Rep1_45_D8	MS/MS count Liver_Rep1_46_D9	MS/MS count Liver_Rep1_47_D10	MS/MS count Liver_Rep1_48_D11	MS/MS count Liver_Rep1_49_D12	MS/MS count Liver_Rep1_50_E1	MS/MS count Liver_Rep1_51_E2	MS/MS count Liver_Rep1_52_E3	MS/MS count Liver_Rep1_53_E4	MS/MS count Liver_Rep1_54_E5	MS/MS count Liver_Rep1_55_E6	MS/MS count Liver_Rep1_56_E7	MS/MS count Liver_Rep1_57_E8	MS/MS count Liver_Rep1_58_E9	MS/MS count Liver_Rep1_59_E10	MS/MS count Liver_Rep1_60_E11	MS/MS count Liver_Rep1_61_E12	MS/MS count Liver_Rep1_62_F1	MS/MS count Liver_Rep1_63_F2	MS/MS count Liver_Rep1_64_F3	MS/MS count Liver_Rep1_65_F4	MS/MS count Liver_Rep1_66_F5	MS/MS count Liver_Rep1_67_F6	MS/MS count Liver_Rep1_68_F7	MS/MS count Liver_Rep1_69_F8	MS/MS count Liver_Rep1_70_F9	MS/MS count Liver_Rep1_71_F10	MS/MS count Liver_Rep1_72_F11	MS/MS count Liver_Rep1_73_F12	MS/MS count Liver_Rep1_74_G1	MS/MS count Liver_Rep1_75_G2	MS/MS count Liver_Rep1_76_G3	MS/MS count Liver_Rep1_77_G4	MS/MS count Liver_Rep1_78_G5	MS/MS count Liver_Rep2_31_C6	MS/MS count Liver_Rep2_32_C7	MS/MS count Liver_Rep2_33_C8	MS/MS count Liver_Rep2_34_C9	MS/MS count Liver_Rep2_35_C10	MS/MS count Liver_Rep2_36_C11	MS/MS count Liver_Rep2_37_C12	MS/MS count Liver_Rep2_38_D1	MS/MS count Liver_Rep2_39_D2	MS/MS count Liver_Rep2_40_D3	MS/MS count Liver_Rep2_41_D4	MS/MS count Liver_Rep2_42_D5	MS/MS count Liver_Rep2_43_D6	MS/MS count Liver_Rep2_44_D7	MS/MS count Liver_Rep2_45_D8	MS/MS count Liver_Rep2_46_D9	MS/MS count Liver_Rep2_47_D10	MS/MS count Liver_Rep2_48_D11	MS/MS count Liver_Rep2_49_D12	MS/MS count Liver_Rep2_50_E1	MS/MS count Liver_Rep2_51_E2	MS/MS count Liver_Rep2_52_E3	MS/MS count Liver_Rep2_53_E4	MS/MS count Liver_Rep2_54_E5	MS/MS count Liver_Rep2_55_E6	MS/MS count Liver_Rep2_56_E7	MS/MS count Liver_Rep2_57_E8	MS/MS count Liver_Rep2_58_E9	MS/MS count Liver_Rep2_59_E10	MS/MS count Liver_Rep2_60_E11	MS/MS count Liver_Rep2_61_E12	MS/MS count Liver_Rep2_62_F1	MS/MS count Liver_Rep2_63_F2	MS/MS count Liver_Rep2_64_F3	MS/MS count Liver_Rep2_65_F4	MS/MS count Liver_Rep2_66_F5	MS/MS count Liver_Rep2_67_F6	MS/MS count Liver_Rep2_68_F7	MS/MS count Liver_Rep2_69_F8	MS/MS count Liver_Rep2_70_F9	MS/MS count Liver_Rep2_71_F10	MS/MS count Liver_Rep2_72_F11	MS/MS count Liver_Rep2_73_F12	MS/MS count Liver_Rep2_74_G1	MS/MS count Liver_Rep2_75_G2	MS/MS count Liver_Rep2_76_G3	MS/MS count Liver_Rep2_77_G4	MS/MS count Liver_Rep2_78_G5	MS/MS count Liver_Rep3_31_C6	MS/MS count Liver_Rep3_32_C7	MS/MS count Liver_Rep3_33_C8	MS/MS count Liver_Rep3_34_C9	MS/MS count Liver_Rep3_35_C10	MS/MS count Liver_Rep3_36_C11	MS/MS count Liver_Rep3_37_C12	MS/MS count Liver_Rep3_38_D1	MS/MS count Liver_Rep3_39_D2	MS/MS count Liver_Rep3_40_D3	MS/MS count Liver_Rep3_41_D4	MS/MS count Liver_Rep3_42_D5	MS/MS count Liver_Rep3_43_D6	MS/MS count Liver_Rep3_44_D7	MS/MS count Liver_Rep3_45_D8	MS/MS count Liver_Rep3_46_D9	MS/MS count Liver_Rep3_47_D10	MS/MS count Liver_Rep3_48_D11	MS/MS count Liver_Rep3_49_D12	MS/MS count Liver_Rep3_50_E1	MS/MS count Liver_Rep3_51_E2	MS/MS count Liver_Rep3_52_E3	MS/MS count Liver_Rep3_53_E4	MS/MS count Liver_Rep3_54_E5	MS/MS count Liver_Rep3_55_E6	MS/MS count Liver_Rep3_56_E7	MS/MS count Liver_Rep3_57_E8	MS/MS count Liver_Rep3_58_E9	MS/MS count Liver_Rep3_59_E10	MS/MS count Liver_Rep3_60_E11	MS/MS count Liver_Rep3_61_E12	MS/MS count Liver_Rep3_62_F1	MS/MS count Liver_Rep3_63_F2	MS/MS count Liver_Rep3_64_F3	MS/MS count Liver_Rep3_65_F4	MS/MS count Liver_Rep3_66_F5	MS/MS count Liver_Rep3_67_F6	MS/MS count Liver_Rep3_68_F7	MS/MS count Liver_Rep3_69_F8	MS/MS count Liver_Rep3_70_F9	MS/MS count Liver_Rep3_71_F10	MS/MS count Liver_Rep3_72_F11	MS/MS count Liver_Rep3_73_F12	MS/MS count Liver_Rep3_74_G1	MS/MS count Liver_Rep3_75_G2	MS/MS count Liver_Rep3_76_G3	MS/MS count Liver_Rep3_77_G4	MS/MS count Liver_Rep3_78_G5	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc1 (2)	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc10	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc11	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc14	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc15	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc16	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc17	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc18	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc19	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc2 (2)	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc20	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc21	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc22	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc23	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc24	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc3 (2)	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc4 (2)	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc5 (2)	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc6	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc8	LFQ intensity 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc9	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac1	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac10	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac11	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac12	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac13	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac14	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac15	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac16	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac17	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac18	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac19	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac2	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac20	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac21	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac22	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac23	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac24	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac3	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac4	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac5	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac6	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac7	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac8	LFQ intensity 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac9	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc1	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc10	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc11	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc12	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc13	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc14	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc15	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc16	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc17	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc18	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc19	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc2	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc20	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc21	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc22	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc23	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc24	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc3	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc4	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc5	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc6	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc7	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc8	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc9	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc12	LFQ intensity 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc13	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc1	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc10	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc11	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc12	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc13	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc14	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc15	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc16	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc17	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc18	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc19	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc2	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc20	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc21	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc22	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc23	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc24	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc3	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc4	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc5	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc6	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc7	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc8	LFQ intensity 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc9	LFQ intensity 20161017_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc7	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F1	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F10_170503153643	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F11	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F12	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F13	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F14	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F15	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F16	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F17	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F18	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F19	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F2	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F20	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F21	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F22	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F23	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F24	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F3	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F4	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F5	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F6	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F7	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F8	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F9	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F1_170427224508	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F10	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F11	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F12	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F13	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F14	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F15	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F16	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F17	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F18	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F19	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F2_170427235251	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F20	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F21	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F22	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F23	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F24	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F3_170428010030	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F4_170428020817	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F5	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F6	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F7	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F8	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F9	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F1	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F10	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F11	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F12	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F13	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F14	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F15	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F16	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F17	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F18	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F19	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F2	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F20	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F21	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F22	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F23	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F24	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F3	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F4	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F5	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F6	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F7	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F8	LFQ intensity 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F9	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc1 (2)	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc10	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc11	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc14	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc15	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc16	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc17	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc18	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc19	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc2 (2)	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc20	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc21	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc22	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc23	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc24	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc3 (2)	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc4 (2)	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc5 (2)	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc6	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc8	MS/MS count 20161006_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc9	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac1	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac10	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac11	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac12	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac13	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac14	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac15	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac16	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac17	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac18	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac19	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac2	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac20	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac21	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac22	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac23	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac24	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac3	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac4	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac5	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac6	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac7	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac8	MS/MS count 20161006_QEp2_PhGe_SA_LC12-14_Top6Top14Depl_SDBC_24Frac_Frac9	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc1	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc10	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc11	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc12	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc13	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc14	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc15	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc16	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc17	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc18	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc19	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc2	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc20	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc21	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc22	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc23	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc24	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc3	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc4	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc5	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc6	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc7	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc8	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads__24Frc_Frc9	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc12	MS/MS count 20161008_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc13	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc1	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc10	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc11	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc12	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc13	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc14	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc15	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc16	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc17	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc18	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc19	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc2	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc20	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc21	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc22	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc23	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc24	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc3	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc4	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc5	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc6	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc7	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc8	MS/MS count 20161013_QEp2_PhGe_SA_LC12-14_Top14Top6Depl_SDB_24Frc_Frc9	MS/MS count 20161017_QEp1_PhGe_SA_LC12-14_Top14Top6Depl_Beads_24Frc_Frc7	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F1	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F10_170503153643	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F11	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F12	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F13	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F14	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F15	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F16	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F17	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F18	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F19	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F2	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F20	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F21	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F22	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F23	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F24	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F3	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F4	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F5	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F6	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F7	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F8	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Cirrhosis_F9	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F1_170427224508	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F10	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F11	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F12	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F13	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F14	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F15	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F16	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F17	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F18	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F19	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F2_170427235251	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F20	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F21	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F22	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F23	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F24	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F3_170428010030	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F4_170428020817	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F5	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F6	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F7	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F8	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_Healthy_F9	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F1	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F10	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F11	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F12	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F13	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F14	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F15	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F16	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F17	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F18	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F19	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F2	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F20	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F21	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F22	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F23	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F24	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F3	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F4	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F5	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F6	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F7	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F8	MS/MS count 20170405_QEp2_PhGe_SA_LC12-14_Liver_Human_NAFLD_F9	MS/MS count	Only identified by site	Reverse	Potential contaminant	id	Peptide IDs	Peptide is razor	Mod. peptide IDs	Evidence IDs	MS/MS IDs	Best MS/MS	Oxidation (M) site IDs	Oxidation (M) site positions
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class II histocompatibility antigen, DRB1-15 beta chain;HLA class II histocompatibility antigen, DRB1-3 chain;HLA class II histocompatibility antigen, DRB1-13 beta chain;HLA class II histocompatibility antigen, DRB1-10 beta chain;HLA class II histocompatibility antigen, DRB1-12 beta chain"	"HLA-DRB1;HLA-DR15;HLA-DRB1*;HLA-DRB1*1327;MHC class II HLA-DRB1 Exon-2;DRB1*13PL;MHC class II HLA-DRB1*1315;HLA-DRB1*1324;HLA-DR3;HLA-C;HLA-DRB3;HLA-DRB1*1302Var;HLA DRB1;MHC class II HLA DRB1-0305;HLA-DR;HLA-DQB1;HLA-DRB;HLA-A;HLA-DR08;HLA-D;HLA-DRB4;DRB1;HLA-DRB5;HLA DRB1*1202;DRB1*08;HLA-DPB1;DPB1;HLA-DR10;HLA-DR4I;HLA-DRB2;HLA-DR-beta1;HLA-DRw12"	";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;"	1834	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	1	1	0	0	0	0	1	1	0	0	0	0	0	0	1	1	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	1	1	0	0	0	0	1	1	0	0	0	0	0	0	1	1	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13.5	13.5	0	29.966	266	"266;66;73;73;73;73;76;78;78;80;81;81;81;82;85;85;85;85;87;88;88;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;90;90;113;120;182;183;183;183;183;183;183;183;189;189;224;232;232;262;262;262;266;266;266;266;266;72;73;73;73;73;73;73;74;74;74;74;75;75;75;78;78;78;78;78;78;78;78;79;80;80;80;81;82;82;84;84;85;85;85;85;85;85;86;86;86;88;88;88;88;88;88;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;89;94;95;102;102;182;182;183;183;183;183;183;183;183;183;183;183;183;183;183;183;183;183;189;217;220;220;224;224;226;232;232;237;237;266;266;266;266;266;266;26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matching																										By MS/MS	By matching					By MS/MS																					By MS/MS					By MS/MS									By MS/MS	By MS/MS							By matching		By MS/MS		By matching						By matching	By matching					By matching	By MS/MS							By matching	By matching	By matching		By matching							By matching																	By matching				By matching	By matching			By MS/MS		By MS/MS																																																																																				By 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matching			By matching								By matching			By matching						By matching	By matching					By matching						By matching			By matching	By matching	By MS/MS	By matching	By matching	By matching												By matching						By matching			By matching		By matching															By matching				By matching					By matching	By matching		By matching																	By matching			By matching																								By matching																																					By matching	By matching			By matching				By matching						By matching	By matching		By matching							By matching	By matching			By matching								By matching			By matching		By matching					By matching	By matching	By matching			By matching	By matching			By matching	By matching					By matching	By matching	By matching	By matching		By matching		By matching			By matching	By matching			By matching	By matching	By matching			By matching		By matching	By matching	By matching	By matching		By matching	By matching		By matching			By matching								By 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+"""
+    file_path = write_test_data(
+        data=TEST_DATA, directory=tmp_path, test_case_name=TEST_FILE_NAME
+    )
+    reference = get_local_reference_data(test_case_name=TEST_FILE_NAME)
+
+    return file_path, reference
+
+
+@pytest.fixture(scope="function")
+def example_spectronaut_tsv(tmp_path) -> Path:
+    """Get and parse real spectronaut protein group report matrix (pivot report)."""
+    TEST_FILE_NAME = "pg_spectronaut_18.0.tsv"
+    TEST_DATA = """PG.Genes	PG.Organisms	PG.ProteinNames	PTM.CollapseKey	PTM.FlankingRegion	PTM.ModificationTitle	PTM.Multiplicity	PTM.ProteinId	PTM.SiteAA	PTM.SiteLocation	[1] 20180815_QE3_nLC3_AH_DIA_Honly_ind_01.raw.PTM.Quantity	[2] 20180815_QE3_nLC3_AH_DIA_Honly_ind_02.raw.PTM.Quantity	[3] 20180815_QE3_nLC3_AH_DIA_Honly_ind_03.raw.PTM.Quantity	[4] 20180815_QE3_nLC3_AH_DIA_Yonly_ind_01.raw.PTM.Quantity	[5] 20180815_QE3_nLC3_AH_DIA_Yonly_ind_02.raw.PTM.Quantity	[6] 20180815_QE3_nLC3_AH_DIA_Yonly_ind_03.raw.PTM.Quantity	[7] 20180816_QE3_nLC3_AH_DIA_H100_Y100_01.raw.PTM.Quantity	[8] 20180816_QE3_nLC3_AH_DIA_H100_Y100_02.raw.PTM.Quantity	[9] 20180816_QE3_nLC3_AH_DIA_H100_Y100_03.raw.PTM.Quantity	[10] 20180816_QE3_nLC3_AH_DIA_H100_Y100_04.raw.PTM.Quantity	[11] 20180816_QE3_nLC3_AH_DIA_H100_Y100_05.raw.PTM.Quantity	[12] 20180816_QE3_nLC3_AH_DIA_H100_Y100_06.raw.PTM.Quantity	[13] 20180816_QE3_nLC3_AH_DIA_H100_Y150_01.raw.PTM.Quantity	[14] 20180816_QE3_nLC3_AH_DIA_H100_Y150_02.raw.PTM.Quantity	[15] 20180816_QE3_nLC3_AH_DIA_H100_Y150_03.raw.PTM.Quantity	[16] 20180816_QE3_nLC3_AH_DIA_H100_Y150_04.raw.PTM.Quantity	[17] 20180816_QE3_nLC3_AH_DIA_H100_Y150_05.raw.PTM.Quantity	[18] 20180816_QE3_nLC3_AH_DIA_H100_Y150_06.raw.PTM.Quantity	[19] 20180816_QE3_nLC3_AH_DIA_H100_Y200_01.raw.PTM.Quantity	[20] 20180816_QE3_nLC3_AH_DIA_H100_Y200_02.raw.PTM.Quantity	[21] 20180816_QE3_nLC3_AH_DIA_H100_Y200_03.raw.PTM.Quantity	[22] 20180816_QE3_nLC3_AH_DIA_H100_Y200_04.raw.PTM.Quantity	[23] 20180816_QE3_nLC3_AH_DIA_H100_Y200_05.raw.PTM.Quantity	[24] 20180816_QE3_nLC3_AH_DIA_H100_Y200_06.raw.PTM.Quantity	[25] 20180816_QE3_nLC3_AH_DIA_H100_Y25_01.raw.PTM.Quantity	[26] 20180816_QE3_nLC3_AH_DIA_H100_Y25_02.raw.PTM.Quantity	[27] 20180816_QE3_nLC3_AH_DIA_H100_Y25_03.raw.PTM.Quantity	[28] 20180816_QE3_nLC3_AH_DIA_H100_Y25_04.raw.PTM.Quantity	[29] 20180816_QE3_nLC3_AH_DIA_H100_Y25_05.raw.PTM.Quantity	[30] 20180816_QE3_nLC3_AH_DIA_H100_Y25_06.raw.PTM.Quantity	[31] 20180816_QE3_nLC3_AH_DIA_H100_Y50_01.raw.PTM.Quantity	[32] 20180816_QE3_nLC3_AH_DIA_H100_Y50_02.raw.PTM.Quantity	[33] 20180816_QE3_nLC3_AH_DIA_H100_Y50_03.raw.PTM.Quantity	[34] 20180816_QE3_nLC3_AH_DIA_H100_Y50_04.raw.PTM.Quantity	[35] 20180816_QE3_nLC3_AH_DIA_H100_Y50_05.raw.PTM.Quantity	[36] 20180816_QE3_nLC3_AH_DIA_H100_Y50_06.raw.PTM.Quantity
+TRBV19;TRB	Homo sapiens	TVB19_HUMAN;TRBR1_HUMAN	A0A075B6N1_S86_M3	IAEGYSVSREKKESF	Phospho (STY)	3	A0A075B6N1	S	86	Filtered	Filtered	Filtered	Filtered	Filtered	Filtered	89374.65625	Filtered	90181.578125	96197.0703125	89868.4375	88778.9453125	75351.0234375	80948.8515625	80663.4296875	84789.296875	79565.1875	76369.9921875	76147.9609375	75591.015625	75025.4609375	73621.09375	70005.9140625	71209.375	111330.484375	89729.921875	69968.8359375	103632.6015625	90488.9296875	113429.859375	96970.2734375	61069.171875	99673.2734375	109199.875	112307.4765625	112374.84375
+TRBV19;TRB	Homo sapiens	TVB19_HUMAN;TRBR1_HUMAN	A0A075B6N1_S84_M3	GDIAEGYSVSREKKE	Phospho (STY)	3	A0A075B6N1	S	84	Filtered	Filtered	Filtered	Filtered	Filtered	Filtered	89374.65625	Filtered	90181.578125	96197.0703125	89868.4375	88778.9453125	75351.0234375	80948.8515625	80663.4296875	84789.296875	79565.1875	76369.9921875	76147.9609375	75591.015625	75025.4609375	73621.09375	70005.9140625	71209.375	111330.484375	89729.921875	69968.8359375	103632.6015625	90488.9296875	113429.859375	96970.2734375	61069.171875	99673.2734375	109199.875	112307.4765625	112374.84375
+TRBV19;TRB	Homo sapiens	TVB19_HUMAN;TRBR1_HUMAN	A0A075B6N1_Y83_M3	KGDIAEGYSVSREKK	Phospho (STY)	3	A0A075B6N1	Y	83	Filtered	Filtered	Filtered	Filtered	Filtered	Filtered	89374.65625	Filtered	90181.578125	96197.0703125	89868.4375	88778.9453125	75351.0234375	80948.8515625	80663.4296875	84789.296875	79565.1875	76369.9921875	76147.9609375	75591.015625	75025.4609375	73621.09375	70005.9140625	71209.375	111330.484375	89729.921875	69968.8359375	103632.6015625	90488.9296875	113429.859375	96970.2734375	61069.171875	99673.2734375	109199.875	112307.4765625	112374.84375
+TRBV19;TRB	Homo sapiens	TVB19_HUMAN;TRBR1_HUMAN	P0DSE2_S86_M3	IAEGYSVSREKKESF	Phospho (STY)	3	P0DSE2	S	86	Filtered	Filtered	Filtered	Filtered	Filtered	Filtered	89374.65625	Filtered	90181.578125	96197.0703125	89868.4375	88778.9453125	75351.0234375	80948.8515625	80663.4296875	84789.296875	79565.1875	76369.9921875	76147.9609375	75591.015625	75025.4609375	73621.09375	70005.9140625	71209.375	111330.484375	89729.921875	69968.8359375	103632.6015625	90488.9296875	113429.859375	96970.2734375	61069.171875	99673.2734375	109199.875	112307.4765625	112374.84375
+TRBV19;TRB	Homo sapiens	TVB19_HUMAN;TRBR1_HUMAN	P0DSE2_S84_M3	GDIAEGYSVSREKKE	Phospho (STY)	3	P0DSE2	S	84	Filtered	Filtered	Filtered	Filtered	Filtered	Filtered	89374.65625	Filtered	90181.578125	96197.0703125	89868.4375	88778.9453125	75351.0234375	80948.8515625	80663.4296875	84789.296875	79565.1875	76369.9921875	76147.9609375	75591.015625	75025.4609375	73621.09375	70005.9140625	71209.375	111330.484375	89729.921875	69968.8359375	103632.6015625	90488.9296875	113429.859375	96970.2734375	61069.171875	99673.2734375	109199.875	112307.4765625	112374.84375
+TRBV19;TRB	Homo sapiens	TVB19_HUMAN;TRBR1_HUMAN	P0DSE2_Y83_M3	KGDIAEGYSVSREKK	Phospho (STY)	3	P0DSE2	Y	83	Filtered	Filtered	Filtered	Filtered	Filtered	Filtered	89374.65625	Filtered	90181.578125	96197.0703125	89868.4375	88778.9453125	75351.0234375	80948.8515625	80663.4296875	84789.296875	79565.1875	76369.9921875	76147.9609375	75591.015625	75025.4609375	73621.09375	70005.9140625	71209.375	111330.484375	89729.921875	69968.8359375	103632.6015625	90488.9296875	113429.859375	96970.2734375	61069.171875	99673.2734375	109199.875	112307.4765625	112374.84375
+RAMACL;RAMAC	Homo sapiens	RMACL_HUMAN;RAMAC_HUMAN	A0A3B3IU46_S36_M1	YLKRPPESPPIVEEW	Phospho (STY)	1	A0A3B3IU46	S	36	Filtered	Filtered	Filtered	Filtered	Filtered	Filtered	1200.7196044921875	5300.68896484375	4638.056640625	4712.28076171875	3450.970703125	5380.7333984375	7731.48486328125	6493.57861328125	5718.142578125	6750.22802734375	6919.2783203125	6276.05029296875	5876.96875	8595.048828125	4630.2802734375	3050.944580078125	Filtered	7158.28369140625	Filtered	4104.6337890625	4239.0849609375	3748.393798828125	2717.6083984375	5581.71435546875	1382.2950439453125	7370.5205078125	5632.4931640625	5181.73046875	4633.93701171875	4836.95556640625
+RAMACL;RAMAC	Homo sapiens	RMACL_HUMAN;RAMAC_HUMAN	Q9BTL3_S36_M1	YLKRPPESPPIVEEW	Phospho (STY)	1	Q9BTL3	S	36	Filtered	Filtered	Filtered	Filtered	Filtered	Filtered	1200.7196044921875	5300.68896484375	4638.056640625	4712.28076171875	3450.970703125	5380.7333984375	7731.48486328125	6493.57861328125	5718.142578125	6750.22802734375	6919.2783203125	6276.05029296875	5876.96875	8595.048828125	4630.2802734375	3050.944580078125	Filtered	7158.28369140625	Filtered	4104.6337890625	4239.0849609375	3748.393798828125	2717.6083984375	5581.71435546875	1382.2950439453125	7370.5205078125	5632.4931640625	5181.73046875	4633.93701171875	4836.95556640625
+"""
+    file_path = write_test_data(
+        data=TEST_DATA, directory=tmp_path, test_case_name=TEST_FILE_NAME
+    )
+    reference = get_local_reference_data(test_case_name=TEST_FILE_NAME)
+
+    return file_path, reference
+
+
+@pytest.fixture(scope="function")
+def example_spectronaut_parquet(tmp_path) -> Path:
+    """Get and parse real spectronaut protein group report matrix (pivot report) in parquet format."""
+    URL = "https://datashare.biochem.mpg.de/s/W5ZgzVymP2qDSca"
+    REF_URL = "https://datashare.biochem.mpg.de/s/nhxU8NZXQt35BWw"
+
+    return get_remote_data_with_ref(url=URL, ref_url=REF_URL, directory=tmp_path)
+
+
+@pytest.fixture(scope="function")
+def example_fragpipe_tsv(tmp_path) -> Path:
+    """Get and parse real FragPipe protein group report matrix (protein.tsv)."""
+    TEST_FILE_NAME = "pg_fragpipe"
+    TEST_DATA = """Protein Group	SubGroup	Protein	Protein ID	Entry Name	Gene Names	Protein Length	Coverage	Organism	Protein Existence	Description	Protein Probability	Top Peptide Probability	Unique Stripped Peptides	Summarized Total Spectral Count	Summarized Unique Spectral Count	S1 Razor Intensity	S2 Razor Intensity	S3 Razor Intensity	S4 Razor Intensity	S5 Razor Intensity	S6 Razor Intensity	S7 Razor Intensity	S8 Razor Intensity	S9 Razor Intensity	S10 Razor Intensity	S11 Razor Intensity	S12 Razor Intensity	S13 Razor Intensity	S14 Razor Intensity	S15 Razor Intensity	S16 Razor Intensity	S17 Razor Intensity	S18 Razor Intensity	S19 Razor Intensity	S20 Razor Intensity
+679	a	sp|P02790|HEMO_HUMAN	P02790	HEMO_HUMAN	HPX	462	82.9	Homo sapiens OX=9606	1:Experimental evidence at protein level	Hemopexin	1.0	0.9990000000000001	95	25026	25025	2216637.5	2295583.8	1240315.4	106460.28	1019385.2	2596973.0	3091005.2	2327599.5	2323380.0	3109355.8	2113776.8	2301295.2	2451093.5	142603.97	946154.75	3126271.8	2970801.5	2399545.8	3020956.8	3691187.2
+680	a	sp|P02792|FRIL_HUMAN	P02792	FRIL_HUMAN	FTL	175	40.6	Homo sapiens OX=9606	1:Experimental evidence at protein level	Ferritin light chain	1.0	0.9990000000000001	18	69	67	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
+681	a	sp|P02794|FRIH_HUMAN	P02794	FRIH_HUMAN	FTH1	183	53.6	Homo sapiens OX=9606	1:Experimental evidence at protein level	Ferritin heavy chain	1.0	0.9990000000000001	15	15	15	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
+682	a	sp|P03951|FA11_HUMAN	P03951	FA11_HUMAN	F11	625	20.2	Homo sapiens OX=9606	1:Experimental evidence at protein level	Coagulation factor XI	1.0	0.9990000000000001	11	18	18	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
+683	a	sp|P03952|KLKB1_HUMAN	P03952	KLKB1_HUMAN	KLKB1	638	41.7	Homo sapiens OX=9606	1:Experimental evidence at protein level	Plasma kallikrein	1.0	0.9990000000000001	23	1022	1022	0.0	85066.71	0.0	0.0	74640.38	118894.164	111398.06	59677.086	45627.31200000001	36386.727	38690.133	70755.9	70384.055	102087.5	106722.82	102985.125	99397.76	45197.56	54068.883	45319.242
+684	a	sp|P04003|C4BPA_HUMAN	P04003	C4BPA_HUMAN	C4BPA	597	40.2	Homo sapiens OX=9606	1:Experimental evidence at protein level	C4b-binding protein alpha chain	1.0	0.9990000000000001	26	1645	1645	0.0	0.0	0.0	0.0	0.0	112257.234	30634.523	112197.33	107021.34	95892.05	100655.766	77396.234	78481.19	0.0	0.0	0.0	55184.43	25498.191000000006	43999.35	32183.307
+685	a	sp|P04004|VTNC_HUMAN	P04004	VTNC_HUMAN	VTN	478	51.0	Homo sapiens OX=9606	1:Experimental evidence at protein level	Vitronectin	1.0	0.9990000000000001	41	10829	10812	426109.1	531158.4	280231.38	972440.7	925719.9	1446606.2	841194.25	850832.94	911400.2	461015.6	349032.28	877507.94	1113970.9	980389.94	1374961.0	1188514.5	870155.6	1299377.1	1360895.5	614073.56
+686	a	sp|P04040|CATA_HUMAN	P04040	CATA_HUMAN	CAT	527	43.8	Homo sapiens	1:Experimental evidence at protein level	Catalase	1.0	0.9990000000000001	18	23	23	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
+687	a	sp|P04070|PROC_HUMAN	P04070	PROC_HUMAN	PROC	461	43.4	Homo sapiens OX=9606	1:Experimental evidence at protein level	Vitamin K-dependent protein C	1.0	0.9990000000000001	15	65	65	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	39016.97	0.0	0.0	0.0
+688	a	sp|P04114|APOB_HUMAN	P04114	APOB_HUMAN	APOB	4563	75.5	Homo sapiens OX=9606	1:Experimental evidence at protein level	Apolipoprotein B-100	1.0	0.9990000000000001	573	103725	103716	603013.44	923688.06	591751.25	491850.03	397211.94	506224.94	319749.8	263752.28	390402.94	443494.1	498007.12	230024.48	265819.75	687710.9	762252.1	422017.75	1020169.75	196046.12	318726.28	480642.72
+"""
+
+    file_path = write_test_data(
+        data=TEST_DATA, directory=tmp_path, test_case_name=TEST_FILE_NAME
+    )
+    reference = get_local_reference_data(test_case_name=TEST_FILE_NAME)
+
+    return file_path, reference
+
+
+@pytest.fixture(scope="function")
+def example_mztab(tmp_path) -> Path:
+    """Get and parse real MZTab report"""
+    URL = "https://datashare.biochem.mpg.de/s/ayieQHU9zjY89cl"
+    REF_URL = "https://datashare.biochem.mpg.de/s/o7K2FEAmpmLUglS"
+
+    return get_remote_data_with_ref(url=URL, ref_url=REF_URL, directory=tmp_path)
+
+
+@pytest.fixture(scope="function")
+def example_mztab_minimal(tmp_path) -> Path:
+    """Get and parse minimal MZTab report for local testing"""
+    TEST_FILE_NAME = "pg_mztab_minimal"
+    TEST_DATA = """COM	Only variable modifications can be reported when the original source is a PRIDE XML file
+
+PRH	accession	description	taxid	species	database	database_version	search_engine	best_search_engine_score[1]	search_engine_score[1]_ms_run[1]	num_psms_ms_run[1]	num_peptides_distinct_ms_run[1]	num_peptides_unique_ms_run[1]	ambiguity_members	modifications	protein_coverage	protein_abundance_assay[1]	protein_abundance_assay[2]	protein_abundance_assay[3]	protein_abundance_assay[4]
+PRT	223462890	Spna2 protein [Mus musculus]	10090	Mus musculus (Mouse)	NCBInr_2010_10	nr_101020.fasta	[MS, MS:1001207, Mascot, ]	6539.67	6539.67	157	92	null	null	null	0	1	0.853	0.864	0.791
+PRT	19855078	RecName: Full=Sodium/potassium-transporting ATPase subunit alpha-3; Short=Na(+)/K(+) ATPase alpha-3 subunit; AltName: Full=Na(+)/K(+) ATPase alpha(III) subunit; AltName: Full=Sodium pump subunit alpha-3	10090	Mus musculus (Mouse)	NCBInr_2010_10	nr_101020.fasta	[MS, MS:1001207, Mascot, ]	6331.91	6331.91	144	49	null	null	32-MOD:00425,525-MOD:00425,606-MOD:00425,725-MOD:00425,739-MOD:00425,940-MOD:00425	0	null	null	null	null
+PRT	21450277	sodium/potassium-transporting ATPase subunit alpha-1 precursor [Mus musculus]	10090	Mus musculus (Mouse)	NCBInr_2010_10	nr_101020.fasta	[MS, MS:1001207, Mascot, ]	4577.11	4577.11	112	39	null	null	42-MOD:00425,616-MOD:00425,749-MOD:00425,950-MOD:00425	0	1	0.776	0.819	0.687
+PRT	6978545	sodium/potassium-transporting ATPase subunit alpha-2 precursor [Rattus norvegicus]	10090	Mus musculus (Mouse)	NCBInr_2010_10	nr_101020.fasta	[MS, MS:1001207, Mascot, ]	4342.81	4342.81	108	42	null	null	40-MOD:00425,613-MOD:00425,746-MOD:00425,947-MOD:00425	0	1	0.784	0.848	0.693
+    """
+    file_path = write_test_data(
+        data=TEST_DATA, directory=tmp_path, test_case_name=TEST_FILE_NAME
+    )
+    reference = get_local_reference_data(test_case_name=TEST_FILE_NAME)
+
+    return file_path, reference
diff --git a/tests/integration/reference_data/reference_pg_alphadia_1.10.0.tsv.parquet b/tests/integration/reference_data/reference_pg_alphadia_1.10.0.tsv.parquet
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diff --git a/tests/integration/reference_data/reference_pg_alphapept_0.5.3.tsv.parquet b/tests/integration/reference_data/reference_pg_alphapept_0.5.3.tsv.parquet
new file mode 100644
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diff --git a/tests/integration/reference_data/reference_pg_diann_1.8.1.tsv.parquet b/tests/integration/reference_data/reference_pg_diann_1.8.1.tsv.parquet
new file mode 100644
index 00000000..f1e5ec46
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diff --git a/tests/integration/reference_data/reference_pg_fragpipe.parquet b/tests/integration/reference_data/reference_pg_fragpipe.parquet
new file mode 100644
index 00000000..e7751798
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diff --git a/tests/integration/reference_data/reference_pg_maxquant.2024.tsv.parquet b/tests/integration/reference_data/reference_pg_maxquant.2024.tsv.parquet
new file mode 100644
index 00000000..92f55b43
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diff --git a/tests/integration/reference_data/reference_pg_mztab_minimal.parquet b/tests/integration/reference_data/reference_pg_mztab_minimal.parquet
new file mode 100644
index 00000000..2bd11b55
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diff --git a/tests/integration/reference_data/reference_pg_spectronaut_18.0.tsv.parquet b/tests/integration/reference_data/reference_pg_spectronaut_18.0.tsv.parquet
new file mode 100644
index 00000000..7afad5c6
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diff --git a/tests/integration/test_pg_reader_provider.py b/tests/integration/test_pg_reader_provider.py
index 4a7854ab..5d5d1f7a 100644
--- a/tests/integration/test_pg_reader_provider.py
+++ b/tests/integration/test_pg_reader_provider.py
@@ -1,6 +1,15 @@
 """Integration tests for protein group reader provider."""
 
-from alphabase.pg_reader import AlphaDiaPGReader, DiannPGReader, pg_reader_provider
+from alphabase.pg_reader import (
+    AlphaDiaPGReader,
+    AlphaPeptPGReader,
+    DiannPGReader,
+    FragPipePGReader,
+    MaxQuantPGReader,
+    MZTabPGReader,
+    SpectronautPGReader,
+    pg_reader_provider,
+)
 
 
 class TestAlphaDiaPGReaderProvider:
@@ -17,3 +26,43 @@ def test_reader_provider(self) -> None:
         reader = pg_reader_provider.get_reader("diann")
 
         assert isinstance(reader, DiannPGReader)
+
+
+class TestAlphapeptPGReaderProvider:
+    def test_reader_provider(self) -> None:
+        """Test whether reader provider initializes alphapept protein group reader correctly."""
+        reader = pg_reader_provider.get_reader("alphapept")
+
+        assert isinstance(reader, AlphaPeptPGReader)
+
+
+class TestMaxQuantPGReaderProvider:
+    def test_reader_provider(self) -> None:
+        """Test whether reader provider initializes MaxQuant protein group reader correctly."""
+        reader = pg_reader_provider.get_reader("maxquant")
+
+        assert isinstance(reader, MaxQuantPGReader)
+
+
+class TestSpectronautPGReaderProvider:
+    def test_reader_provider(self) -> None:
+        """Test whether reader provider initializes spectronaut protein group reader correctly."""
+        reader = pg_reader_provider.get_reader("spectronaut")
+
+        assert isinstance(reader, SpectronautPGReader)
+
+
+class TestFragPipePGReaderProvider:
+    def test_reader_provider(self) -> None:
+        """Test whether reader provider initializes FragPipe protein group reader correctly."""
+        reader = pg_reader_provider.get_reader("fragpipe")
+
+        assert isinstance(reader, FragPipePGReader)
+
+
+class TestMZTabPGReaderProvider:
+    def test_reader_provider(self) -> None:
+        """Test whether reader provider initializes MZTab protein group reader correctly."""
+        reader = pg_reader_provider.get_reader("mztab")
+
+        assert isinstance(reader, MZTabPGReader)
diff --git a/tests/integration/test_pg_readers.py b/tests/integration/test_pg_readers.py
index 687ccbe7..13875838 100644
--- a/tests/integration/test_pg_readers.py
+++ b/tests/integration/test_pg_readers.py
@@ -1,12 +1,24 @@
 """Integration tests for protein group reader."""
 
 import pandas as pd
+import pytest
 
-from alphabase.pg_reader import AlphaDiaPGReader, DiannPGReader
+from alphabase.pg_reader import (
+    AlphaDiaPGReader,
+    AlphaPeptPGReader,
+    DiannPGReader,
+    FragPipePGReader,
+    MaxQuantPGReader,
+    MZTabPGReader,
+    SpectronautPGReader,
+)
+from alphabase.pg_reader.keys import PGCols
 
 
 class TestAlphaDiaPGReaderImportIntegration:
-    def test_import_real_file(self, example_alphadia_tsv: str) -> None:
+    def test_import_real_file(
+        self, example_alphadia_tsv: tuple[str, pd.DataFrame]
+    ) -> None:
         """Test import of real AlphaDIA file"""
         file_path, reference = example_alphadia_tsv
         reader = AlphaDiaPGReader()
@@ -25,3 +37,197 @@ def test_import_real_file(self, example_diann_tsv: str) -> None:
         result_df = reader.import_file(file_path)
 
         pd.testing.assert_frame_equal(result_df, reference)
+
+
+class TestAlphapeptPGReaderImportIntegration:
+    def test_import_csv_file_equivalent(
+        self, example_alphapept_csv: tuple[str, pd.DataFrame]
+    ):
+        """Test that AlphaPeptPGReader default import is exactly equivalent to reference"""
+        file_path, reference = example_alphapept_csv
+        reader = AlphaPeptPGReader()
+
+        result_df = reader.import_file(file_path)
+
+        pd.testing.assert_frame_equal(result_df, reference)
+
+    def test_import_hdf_file_equivalent(
+        self, example_alphapept_hdf: tuple[str, pd.DataFrame]
+    ):
+        """Test that AlphaPeptPGReader default import is exactly equivalent to reference"""
+
+        file_path, reference = example_alphapept_hdf
+        reader = AlphaPeptPGReader()
+
+        result_df = reader.import_file(file_path)
+
+        pd.testing.assert_frame_equal(result_df, reference)
+
+    @pytest.mark.parametrize(
+        ("measurement_regex", "expected_shape", "expected_colums"),
+        [
+            # Default
+            ("raw", (9, 2), ["A", "B"]),
+            # Match lfq key in config
+            ("lfq", (9, 2), ["A_LFQ", "B_LFQ"]),
+            # custom - match LFQ
+            ("LFQ", (9, 2), ["A_LFQ", "B_LFQ"]),
+            # Get all
+            (".*", (9, 4), ["A_LFQ", "B_LFQ", "A", "B"]),
+            # Pass None
+            (None, (9, 4), ["A_LFQ", "B_LFQ", "A", "B"]),
+        ],
+    )
+    def test_import_csv_file(
+        self,
+        example_alphapept_csv: tuple[str, pd.DataFrame],
+        measurement_regex: str,
+        expected_shape: tuple[int, int],
+        expected_colums: list[str],
+    ) -> None:
+        """Test alphapept protein group reader import with real data from alphapept csv report and different parameter combinations.
+
+        Tests whether the reader can import raw data (default), LFQ data, and all columns
+        """
+        file_path, _ = example_alphapept_csv
+
+        reader = AlphaPeptPGReader(measurement_regex=measurement_regex)
+
+        result_df = reader.import_file(file_path)
+
+        assert result_df.shape == expected_shape
+        assert list(result_df.columns) == expected_colums
+        assert result_df.index.names == [
+            PGCols.PROTEINS,
+            PGCols.UNIPROT_IDS,
+            PGCols.ENSEMBL_IDS,
+            PGCols.SOURCE_DB,
+            PGCols.DECOY_INDICATOR,
+        ]
+
+    @pytest.mark.parametrize(
+        ("measurement_regex", "expected_shape", "expected_colums"),
+        [
+            # Default
+            ("raw", (3781, 2), ["A", "B"]),
+            # Match lfq key in config
+            ("lfq", (3781, 2), ["A_LFQ", "B_LFQ"]),
+            # custom - match LFQ
+            ("LFQ", (3781, 2), ["A_LFQ", "B_LFQ"]),
+            # Get all
+            (".*", (3781, 4), ["A_LFQ", "B_LFQ", "A", "B"]),
+            # Pass None
+            (None, (3781, 4), ["A_LFQ", "B_LFQ", "A", "B"]),
+        ],
+    )
+    def test_import_hdf_file(
+        self,
+        example_alphapept_hdf: tuple[str, pd.DataFrame],
+        measurement_regex: str,
+        expected_shape: tuple[int, int],
+        expected_colums: list[str],
+    ) -> None:
+        """Test alphapept protein group reader import with real data from alphapept hdf report and different parameter combinations.
+
+        Tests whether the reader can import raw data (default), LFQ data, and all columns
+        """
+        file_path, _ = example_alphapept_hdf
+        reader = AlphaPeptPGReader(measurement_regex=measurement_regex)
+
+        result_df = reader.import_file(file_path)
+
+        assert result_df.shape == expected_shape
+        assert list(result_df.columns) == expected_colums
+        assert result_df.index.names == [
+            PGCols.PROTEINS,
+            PGCols.UNIPROT_IDS,
+            PGCols.ENSEMBL_IDS,
+            PGCols.SOURCE_DB,
+            PGCols.DECOY_INDICATOR,
+        ]
+
+
+class TestMaxQuantPGReader:
+    def test_import(self, example_maxquant_tsv: str) -> None:
+        """Test import of real MaxQuant file"""
+        file_path, reference = example_maxquant_tsv
+
+        reader = MaxQuantPGReader()
+        result_df = reader.import_file(file_path=file_path)
+
+        pd.testing.assert_frame_equal(result_df, reference)
+
+    @pytest.mark.parametrize(("measurement_regex",), [("raw",), ("lfq",)])
+    def test_measurement_regex(
+        self, example_maxquant_tsv: tuple[str, pd.DataFrame], measurement_regex: str
+    ) -> None:
+        """Test import with different regular expressions"""
+        file_path, _ = example_maxquant_tsv
+
+        reader = MaxQuantPGReader(measurement_regex=measurement_regex)
+
+        result_df = reader.import_file(file_path=file_path)
+
+        assert result_df.shape == (9, 312)
+        assert result_df.index.names == [
+            PGCols.PROTEINS,
+            PGCols.UNIPROT_IDS,
+            PGCols.GENES,
+            PGCols.DECOY_INDICATOR,
+        ]
+
+
+class TestSpectronautPGReader:
+    def test_import_real_file_tsv(self, example_spectronaut_tsv: str) -> None:
+        """Test import of real spectronaut file"""
+        file_path, reference = example_spectronaut_tsv
+
+        reader = SpectronautPGReader()
+
+        result_df = reader.import_file(file_path=file_path)
+
+        pd.testing.assert_frame_equal(result_df, reference)
+
+    def test_import_real_file_parqet(self, example_spectronaut_parquet: str) -> None:
+        """Test import of real spectronaut file"""
+        file_path, reference = example_spectronaut_parquet
+
+        reader = SpectronautPGReader()
+
+        result_df = reader.import_file(file_path=file_path)
+
+        pd.testing.assert_frame_equal(result_df, reference)
+
+
+class TestFragPipePGReader:
+    def test_import_real_file(self, example_fragpipe_tsv: str) -> None:
+        """Test import of real FragPipe file"""
+        file_path, reference = example_fragpipe_tsv
+
+        reader = FragPipePGReader()
+
+        result_df = reader.import_file(file_path=file_path)
+
+        pd.testing.assert_frame_equal(result_df, reference)
+
+
+class TestMZTabPGReader:
+    def test_import_real_file(self, example_mztab: str) -> None:
+        """Test import of real MZTab file"""
+        file_path, reference = example_mztab
+
+        reader = MZTabPGReader()
+
+        result_df = reader.import_file(file_path=file_path)
+
+        pd.testing.assert_frame_equal(result_df, reference)
+
+    def test_import_minimal_example(self, example_mztab_minimal: str) -> None:
+        """Test import of minimal example MZTab file"""
+        file_path, reference = example_mztab_minimal
+
+        reader = MZTabPGReader()
+
+        result_df = reader.import_file(file_path=file_path)
+
+        pd.testing.assert_frame_equal(result_df, reference)
diff --git a/tests/unit/pg_reader/test_alphapept_pg_reader.py b/tests/unit/pg_reader/test_alphapept_pg_reader.py
new file mode 100644
index 00000000..834f79c3
--- /dev/null
+++ b/tests/unit/pg_reader/test_alphapept_pg_reader.py
@@ -0,0 +1,129 @@
+from typing import Union
+
+import pytest
+
+from alphabase.pg_reader import AlphaPeptPGReader
+
+
+class TestAlphapeptPGReader:
+    """Test suite for AlphapeptPGReader._parse_alphapept_index method."""
+
+    @pytest.fixture
+    def reader(self):
+        """Create a mock AlphapeptPGReader instance."""
+        return AlphaPeptPGReader()
+
+    @pytest.mark.parametrize(
+        "identifier,expected",
+        [
+            # Test case 1: Standard UniProt Swiss-Prot format
+            (
+                "sp|Q9NQT4|EXOS5_HUMAN",
+                {
+                    "source_db": "sp",
+                    "uniprot_ids": "Q9NQT4",
+                    "ensembl_ids": "na",
+                    "proteins": "EXOS5_HUMAN",
+                    "is_decoy": False,
+                },
+            ),
+            # Test case 2: UniProt ID only
+            (
+                "Q0IIK2",
+                {
+                    "source_db": "na",
+                    "uniprot_ids": "Q0IIK2",
+                    "ensembl_ids": "na",
+                    "proteins": "na",
+                    "is_decoy": False,
+                },
+            ),
+            # Test case 3: Multiple UniProt entries
+            (
+                "sp|Q9H2K8|TAOK3_HUMAN,sp|Q7L7X3|TAOK1_HUMAN",
+                {
+                    "source_db": "sp;sp",
+                    "uniprot_ids": "Q9H2K8;Q7L7X3",
+                    "ensembl_ids": "na;na",
+                    "proteins": "TAOK3_HUMAN;TAOK1_HUMAN",
+                    "is_decoy": False,
+                },
+            ),
+            # Test case 4: Ensembl format
+            (
+                "ENSEMBL:ENSBTAP00000024146",
+                {
+                    "source_db": "ENSEMBL",
+                    "uniprot_ids": "na",
+                    "ensembl_ids": "ENSBTAP00000024146",
+                    "proteins": "na",
+                    "is_decoy": False,
+                },
+            ),
+            # Test case 5: Mixed Ensembl and UniProt
+            (
+                "ENSEMBL:ENSBTAP00000024146,sp|P35520|CBS_HUMAN",
+                {
+                    "source_db": "ENSEMBL;sp",
+                    "uniprot_ids": "na;P35520",
+                    "ensembl_ids": "ENSBTAP00000024146;na",
+                    "proteins": "na;CBS_HUMAN",
+                    "is_decoy": False,
+                },
+            ),
+            # Test case 6: Decoy protein with REV__ prefix
+            (
+                "REV__sp|Q13085|ACACA_HUMAN",
+                {
+                    "source_db": "REV__sp",
+                    "uniprot_ids": "Q13085",
+                    "ensembl_ids": "na",
+                    "proteins": "ACACA_HUMAN",
+                    "is_decoy": True,
+                },
+            ),
+        ],
+    )
+    def test_parse_alphapept_index(
+        self,
+        reader: AlphaPeptPGReader,
+        identifier: str,
+        expected: dict[str, Union[str, bool]],
+    ) -> None:
+        """Test _parse_alphapept_index with various identifier formats."""
+
+        result = reader._parse_alphapept_index(identifier)
+
+        # Assert that the result matches the expected output
+        assert result == expected
+
+    def test_parse_alphapept_index_multiple_decoys(
+        self, reader: AlphaPeptPGReader
+    ) -> None:
+        """Test _parse_alphapept_index with multiple decoy entries."""
+        identifier = "REV__sp|Q13085|ACACA_HUMAN,REV__sp|P35520|CBS_HUMAN"
+        expected = {
+            "source_db": "REV__sp;REV__sp",
+            "uniprot_ids": "Q13085;P35520",
+            "ensembl_ids": "na;na",
+            "proteins": "ACACA_HUMAN;CBS_HUMAN",
+            "is_decoy": True,
+        }
+        result = reader._parse_alphapept_index(identifier)
+        assert result == expected
+
+    def test_parse_alphapept_index_mixed_decoy_regular(
+        self, reader: AlphaPeptPGReader
+    ) -> None:
+        """Test _parse_alphapept_index with mixed decoy and regular entries."""
+        identifier = "sp|Q9NQT4|EXOS5_HUMAN,REV__sp|Q13085|ACACA_HUMAN"
+        # This tests whether is_decoy is True if ANY entry is a decoy
+        expected = {
+            "source_db": "sp;REV__sp",
+            "uniprot_ids": "Q9NQT4;Q13085",
+            "ensembl_ids": "na;na",
+            "proteins": "EXOS5_HUMAN;ACACA_HUMAN",
+            "is_decoy": True,  # Assuming True if any entry is decoy
+        }
+        result = reader._parse_alphapept_index(identifier)
+        assert result == expected
diff --git a/tests/unit/pg_reader/test_pg_reader.py b/tests/unit/pg_reader/test_pg_reader.py
index e9d40e03..a27e173f 100644
--- a/tests/unit/pg_reader/test_pg_reader.py
+++ b/tests/unit/pg_reader/test_pg_reader.py
@@ -1,7 +1,7 @@
 """Unit tests for PGReaderBase class."""
 
 import os
-from typing import Any, Generator
+from typing import Any, Generator, Union
 from unittest.mock import Mock, patch
 
 import pandas as pd
@@ -16,8 +16,14 @@ class ExamplePGReader(PGReaderBase):
     _reader_type = "test_reader"
 
 
-@pytest.fixture
-def mock_yaml_data() -> dict[str, Any]:
+@pytest.fixture(
+    params=[
+        {"measurement_regex": None},
+        {"measurement_regex": {"lfq": "Sample_[0-9]+_LFQ"}},
+        {"measurement_regex": {"raw": "Sample_[0-9]+", "lfq": r"Sample_\d+_LFQ"}},
+    ]
+)
+def mock_yaml_data(request) -> dict[str, Any]:
     """Mock YAML configuration data."""
     return {
         "test_reader": {
@@ -26,7 +32,7 @@ def mock_yaml_data() -> dict[str, Any]:
                 "gene": "Gene Name",
                 "description": "Description",
             },
-            "measurement_regex": r"Sample_\d+_LFQ",
+            "measurement_regex": request.param["measurement_regex"],
         }
     }
 
@@ -108,10 +114,7 @@ def test_init_with_defaults(
         reader = ExamplePGReader()
 
         assert reader.column_mapping == mock_yaml_data["test_reader"]["column_mapping"]
-        assert (
-            reader.measurement_regex
-            == mock_yaml_data["test_reader"]["measurement_regex"]
-        )
+        assert reader.measurement_regex is None
 
     @patch("alphabase.pg_reader.pg_reader.pg_reader_yaml")
     def test_init_with_custom_column_mapping(
@@ -124,10 +127,7 @@ def test_init_with_custom_column_mapping(
         reader = ExamplePGReader(column_mapping=custom_mapping)
 
         assert reader.column_mapping == custom_mapping
-        assert (
-            reader.measurement_regex
-            == mock_yaml_data["test_reader"]["measurement_regex"]
-        )
+        assert reader.measurement_regex is None
 
     @patch("alphabase.pg_reader.pg_reader.pg_reader_yaml")
     @pytest.mark.parametrize(("custom_regex",), [(r".*_intensity$",), ("_intensity",)])
@@ -171,6 +171,89 @@ def test_override_existing_mapping(self, mock_yaml, mock_yaml_data):
         assert reader.column_mapping["gene"] == "Gene Name"  # Unchanged
 
 
+class TestGetMeasurementRegex:
+    """Test `_get_measurement_regex` method"""
+
+    @pytest.fixture(
+        params=[
+            # argument is found in config -> retrieve value
+            {
+                "measurement_regex_argument": "lfq",
+                "config_measurement_regex_value": {"lfq": "Sample_[0-9]+_LFQ"},
+                "expected": "Sample_[0-9]+_LFQ",
+            },
+            {
+                "measurement_regex_argument": "lfq",
+                "config_measurement_regex_value": {
+                    "raw": "Sample_[0-9]+",
+                    "lfq": "Sample_[0-9]+_LFQ",
+                },
+                "expected": "Sample_[0-9]+_LFQ",
+            },
+            # argument is not found in config -> pass it through
+            {
+                "measurement_regex_argument": "no_match_in_config",
+                "config_measurement_regex_value": {"lfq": "Sample_[0-9]+_LFQ"},
+                "expected": "no_match_in_config",
+            },
+            # special case: config is None
+            {
+                "measurement_regex_argument": "regex",
+                "config_measurement_regex_value": None,
+                "expected": "regex",
+            },
+            # argument is None -> return argument (None)
+            {
+                "measurement_regex_argument": None,
+                "config_measurement_regex_value": {"lfq": "Sample_[0-9]+_LFQ"},
+                "expected": None,
+            },
+            {
+                "measurement_regex_argument": None,
+                "config_measurement_regex_value": {
+                    "raw": "Sample_[0-9]+",
+                    "lfq": r"Sample_\d+_LFQ",
+                },
+                "expected": None,
+            },
+            # special case: config is None
+            {
+                "measurement_regex_argument": None,
+                "config_measurement_regex_value": None,
+                "expected": None,
+            },
+        ]
+    )
+    def configuration_options(
+        self,
+        request,
+    ) -> tuple[Union[str, None], dict[str, Any], Union[str, None]]:
+        """Mock YAML configuration data and return expected output"""
+        measurement_regex_argument = request.param["measurement_regex_argument"]
+
+        reader_config = {
+            "column_mapping": {
+                "protein": "Protein ID",
+                "gene": "Gene Name",
+                "description": "Description",
+            },
+            "measurement_regex": request.param["config_measurement_regex_value"],
+        }
+
+        expected = request.param["expected"]
+
+        return measurement_regex_argument, reader_config, expected
+
+    @patch("alphabase.pg_reader.pg_reader.pg_reader_yaml")
+    def test_measurement_regex(self, mock_yaml, configuration_options) -> None:
+        measurement_regex_argument, reader_config, expected = configuration_options
+
+        mock_yaml.__getitem__.return_value = reader_config
+        reader = ExamplePGReader()
+
+        assert reader._get_measurement_regex(measurement_regex_argument) == expected
+
+
 class TestPreProcess:
     """Test _pre_process method."""
 
diff --git a/tests/unit/pg_reader/test_pg_reader_provider.py b/tests/unit/pg_reader/test_pg_reader_provider.py
index c6f7b088..0404e5c8 100644
--- a/tests/unit/pg_reader/test_pg_reader_provider.py
+++ b/tests/unit/pg_reader/test_pg_reader_provider.py
@@ -22,7 +22,7 @@ def mock_yaml_data() -> dict[str, Any]:
                 "gene": "Gene Name",
                 "description": "Description",
             },
-            "measurement_regex": r"Sample_\d+_LFQ",
+            "measurement_regex": {"lfq": "Sample_[0-9]+_LFQ"},
         }
     }