testBDa/DESCRIPTION at main · MangiolaLaboratory/testBDa · GitHub

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Package: testBDa
Type: Package
Title: Benchmarks for Differential Beta-Dispersion on Compositional Data
Version: 0.1.0
Authors@R:
    person(given = "Stefano",
           family = "Mangiola",
           email = "mangiolastefano@gmail.com",
           role = c("aut", "cre"))
Description: Helpers, simulators, and per-cohort benchmark pipelines for the
    paper "Beta dispersion lacks interpretability for differential stochastic
    dispersion analyses." Generates compositional beta-binomial count data
    from sccomp fits and benchmarks PERMDISP (vegan::betadisper) and PERMANOVA
    (vegan::adonis2) across Bray-Curtis, Aitchison, robust Aitchison, Jaccard,
    and Hellinger distances under controlled differential-abundance and
    differential-dispersion scenarios.
URL: https://github.com/MangiolaLaboratory/testBDa
BugReports: https://github.com/MangiolaLaboratory/testBDa/issues
License: GPL-2
Encoding: UTF-8
LazyData: true
VignetteBuilder: knitr
Roxygen: list(markdown = TRUE)
Imports:
    dplyr,
    ggplot2,
    mia,
    purrr,
    rlang,
    scales,
    S4Vectors,
    sccomp,
    stats,
    SummarizedExperiment,
    tibble,
    tidyr,
    utils,
    vegan,
    VGAM
Suggests:
    here,
    knitr,
    parallelly,
    patchwork,
    quarto,
    rmarkdown,
    stringr,
    targets,
    testthat (>= 3.0.0)
Config/testthat/edition: 3
Config/roxygen2/version: 8.0.0