TraRe/NEWS at master · ML4BM-Lab/TraRe · GitHub

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Changes in Version 0.99.0
 ------------------
 + automatic modules selection in rewiring test.
 + rewiring html report file added.
 + unit tests added.

Changes in Version 0.99.1
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 + vignette file added
 + minor bugs fixed

Changes in Version 0.99.2
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 + rewiring method part parallelized

Changes in Version 0.99.3
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 + excel_generation function added
 + vignette file updated

Changes in Version 0.99.4
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 + class() functions removed.

Changes in Version 0.99.5
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 + openxlsx to xlsx library changed

Changes in Version 0.99.6
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 + vignette files are locally available (instead of github)
 + SummarizedExperiment objects are allowed to use
 + code style and structure has been improved

Changes in Version 0.99.7
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 + Rewiring method outputs every supermodule

Changes in Version 0.99.8
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 + Logfile added to runrewiring method.
 + Message structure of preparerewiring method has been cleaned.

Changes in Version 0.99.9
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 + xlsx files changed to html, library removed
 + generate_cliques structure has changed, new plot function.

Changes in Version 0.99.10
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  + More evaluated chunks in the vignettes

Changes in Version 0.99.11
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  + T/F changed by TRUE/FALSE

Changes in Version 0.99.12
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  + minor bugs fixed

Changes in Version 0.99.13
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  + No changes